Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 1,809,486 | A→C | T455P (ACT→CCT) | katE → | catalase HPII |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 1,809,486 | 0 | A | C | 100.0% | 52.0 / NA | 15 | T455P (ACT→CCT) | katE | catalase HPII |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (8/7); total (8/7) |
ACGTTTGTTCTCCTATACCGATACACAAATCAGTCGTCTTGGTGGGCCGAATTTCCATGAGATTCCGATTAACCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACACTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACGCGGCGGTTTTGAATCATACCAGGAGCGCGTGGAAGGCAATAAAGTTCGCGAGCGCAGCCCAT > NZ_CP009273/1809353‑1809621 | aCGTTTGTTCTCCTATACCGATACACAAATCAGTCGTCTTGGTGGGCCGAATTTCCATGAGATTCCGATTAACCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAAc > 2:292153/1‑139 (MQ=255) aCGTTTGTTCTCCTATACCGATACACAAATCAGTCGTCTTGGTGGGCCGAATTTCCATGAGATTCCGATTAACCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAAc > 2:45973/1‑139 (MQ=255) aTACACAAATCAGTCGTCTTGGTGGGCCGAATTTCCATGAGATTCCGATTAACCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTAcgaaccgaa > 2:381655/1‑139 (MQ=255) acacAAATCAGTCGTCTTGGTGGGCGGAAGTTCCATGAGATTCCGATTAACCGTCAGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGCTCGACCCTAACCCGGCGCATTACGAACCGAACt > 2:130050/1‑139 (MQ=255) caAATCAGTCGTCTTGGTGGGCCGAATTTCCATGAGATTCCGATTAACCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTACGAACCGAACTCGa < 1:381655/139‑1 (MQ=255) aTCAGTCGTCTTGGTGGGCCGAATTTCCATGAGATTCCGATTAACCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTACGAACCGAACTCGAtt > 1:382751/1‑138 (MQ=255) cGAATTTCCATGAGATTCCGATTAACCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGa < 1:391193/139‑1 (MQ=255) aCCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACgcgg < 2:382751/139‑1 (MQ=255) aCCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACgcgg < 2:491296/139‑1 (MQ=255) ccTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACGCGGCGGTTTTg > 1:77691/1‑138 (MQ=255) gCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACGCGGCGGTTTTGaa > 2:69996/1‑137 (MQ=255) cccTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACGCGGCGGTTTTGAAt < 1:292153/137‑1 (MQ=255) cccTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACGCGGCGGTTTTGAAt < 1:69996/137‑1 (MQ=255) cccTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACCCTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACGCGGCGGTTTTGAAt < 2:448238/137‑1 (MQ=255) gACCCTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACGCGGCGGTTTTGAATCATACCAGGAGCGCGTGGAAGGCAATAAAGTTCGCGAGCGCAGCCCAt > 1:482926/1‑139 (MQ=255) | ACGTTTGTTCTCCTATACCGATACACAAATCAGTCGTCTTGGTGGGCCGAATTTCCATGAGATTCCGATTAACCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACACTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACGCGGCGGTTTTGAATCATACCAGGAGCGCGTGGAAGGCAATAAAGTTCGCGAGCGCAGCCCAT > NZ_CP009273/1809353‑1809621 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |