| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,919,822 | T→C | F42F (TTT→TTC) | yobB → | carbon‑nitrogen hydrolase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,919,822 | 0 | T | C | 100.0% | 101.5 / NA | 27 | F42F (TTT→TTC) | yobB | carbon‑nitrogen hydrolase family protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (15/12); total (15/12) | |||||||||||
AAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTTCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCT > NZ_CP009273/1919689‑1919947 | aaGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATc < 1:411592/139‑1 (MQ=255) aTGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGctttct < 1:310257/138‑1 (MQ=255) gAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGgtgt > 2:263821/1‑139 (MQ=255) ttGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGatta > 2:377839/1‑139 (MQ=255) gCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGat > 2:348099/1‑118 (MQ=255) gCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGat < 1:348099/118‑1 (MQ=255) gTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGccc < 2:46374/138‑1 (MQ=255) gTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGccc > 2:361939/1‑138 (MQ=255) actcacCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGAtctc > 2:465859/1‑139 (MQ=255) acCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGAtctctc < 2:421192/137‑1 (MQ=255) cGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGC‑ACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGt > 2:192576/1‑139 (MQ=255) gAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGt < 1:8847/139‑1 (MQ=255) ggTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGAc < 2:266645/139‑1 (MQ=255) gCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCATGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTGTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCg < 1:192555/138‑1 (MQ=255) gCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGa > 2:207525/1‑96 (MQ=255) gCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGa < 1:207525/96‑1 (MQ=255) gCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGc > 2:407972/1‑139 (MQ=255) tcatcTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGt > 1:23340/1‑139 (MQ=255) ttGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAAc > 1:419586/1‑139 (MQ=255) tgtgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGccc > 2:11696/1‑95 (MQ=255) tgtgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGccc < 1:11696/95‑1 (MQ=255) tgtgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAAc > 1:336018/1‑138 (MQ=255) tgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGAc < 1:263821/139‑1 (MQ=255) ggCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTgg > 1:64425/1‑139 (MQ=255) gccgccAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGAtctct > 2:245638/1‑97 (MQ=255) gccgccAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGAtctct < 1:245638/97‑1 (MQ=255) aGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCt > 2:359495/1‑139 (MQ=255) | AAGTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTTCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCT > NZ_CP009273/1919689‑1919947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |