Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 1,982,130 | G→A | intergenic (+104/‑67) | yecR → / → ftnA | YecR‑like lipofamily protein/non‑heme ferritin |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 1,982,130 | 0 | G | A | 100.0% | 34.3 / NA | 10 | intergenic (+104/‑67) | yecR/ftnA | YecR‑like lipofamily protein/non‑heme ferritin |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (3/7); total (3/7) |
TGCCATCATTCCGCCTTCCCTGTCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTGCAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTTGTGGAGCACTATCATGCTGAAACCAGAAATGATTGAAAAACTTAATGAGCAGATGAACC > NZ_CP009273/1981994‑1982242 | tGCCATCATTCCGCCTTCCCTGTCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACa < 2:297868/139‑1 (MQ=255) gCCATCATTCCGCCTTCCCTGTCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACa > 2:414314/1‑138 (MQ=255) gCCTTCCCTGTCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACAAATaataaaata < 2:408704/139‑1 (MQ=255) tCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACAAATAATAAAATAACAAATtat < 2:187615/138‑1 (MQ=255) ttCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTtgtg > 2:353822/1‑137 (MQ=255) gCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAGCCTTTGTGGAGCa < 2:120683/139‑1 (MQ=255) ttAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTTGTGGAGCACTAt > 2:357809/1‑138 (MQ=255) gAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTTGTGGAGCACTATCATGCt < 1:414314/139‑1 (MQ=255) gAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTTGTGGAGCACTATCATGCt < 2:343129/139‑1 (MQ=255) taatTGAAGTTTATATTTTACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTTGTGGAGCACTATCATGCTGAAACCAGAAATGATTGAAAAACTTAATGAGCAGATGAAcc < 2:193451/139‑1 (MQ=255) | TGCCATCATTCCGCCTTCCCTGTCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTGCAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTTGTGGAGCACTATCATGCTGAAACCAGAAATGATTGAAAAACTTAATGAGCAGATGAACC > NZ_CP009273/1981994‑1982242 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |