Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 2,926,085 | A→C | G96G (GGT→GGG) | fucO ← | lactaldehyde reductase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 2,926,085 | 0 | A | C | 100.0% | 182.9 / NA | 50 | G96G (GGT→GGG) | fucO | lactaldehyde reductase |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (25/25); total (25/25) |
TGGTAGGAATTGCCAGAATCGGTACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCACCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGCCCATGCCAGCCCTGCAGCATCCATCTTATC > NZ_CP009273/2925955‑2926219 | tgGTAGGAATTGCCAGAATCGGTACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAAt < 1:17060/139‑1 (MQ=255) ggTAGGAATTGCCAGAATCGGTACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCaa > 2:122216/1‑137 (MQ=255) ggAATTGCCAGAATCGGTACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCg < 2:308380/138‑1 (MQ=255) tGCCAGAATCGGTACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAgg > 1:95966/1‑139 (MQ=255) tGCCAGAATCGGTACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAgg > 1:415634/1‑139 (MQ=255) tGCCAGAATCGGTACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAgg > 2:241926/1‑139 (MQ=255) tACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGcgccg < 2:95966/139‑1 (MQ=255) tACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGcgccg < 1:452640/139‑1 (MQ=255) tACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGcgccg > 2:228704/1‑139 (MQ=255) tACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGcgccg < 1:361279/139‑1 (MQ=255) acTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTa < 1:241926/139‑1 (MQ=255) ggTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTAtt < 1:55537/137‑1 (MQ=255) ggTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTAtt < 1:324095/137‑1 (MQ=255) ggTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTAtt < 2:415634/137‑1 (MQ=255) tCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACAcc > 1:360788/1‑139 (MQ=255) tCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTga > 1:374052/1‑139 (MQ=255) tCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTga > 2:477218/1‑139 (MQ=255) ccAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTgac > 1:421312/1‑139 (MQ=255) cTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAg < 2:303540/139‑1 (MQ=255) cGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGt < 1:99502/137‑1 (MQ=255) acaTCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAAttg < 2:360788/139‑1 (MQ=255) acaTCGGCAAACTCCGGGTGGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAAttg < 1:207840/139‑1 (MQ=255) aTCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAAttgtt > 2:95256/1‑139 (MQ=255) cAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTgttgggtt < 2:365471/139‑1 (MQ=255) cAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTgttgggtt < 1:122216/139‑1 (MQ=255) gtttttGCTGATAATGCCAATCCCTTTACAAGTCTCCTGTGGGGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACg < 1:422658/139‑1 (MQ=255) ttgCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGc > 1:173722/1‑96 (MQ=255) ttgCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGc < 2:173722/96‑1 (MQ=255) ttgCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCcgt > 1:273790/1‑139 (MQ=255) ttgCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCcgt > 2:330285/1‑139 (MQ=255) tgCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCcgtc > 2:199848/1‑139 (MQ=255) cTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCcgtcg > 1:189025/1‑138 (MQ=255) tGCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGc > 1:468940/1‑139 (MQ=255) gCCAATCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGcc > 1:277974/1‑139 (MQ=255) tCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGCCCATGc < 2:421312/139‑1 (MQ=255) tCGCTTTACAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGCCCATGc < 2:374052/139‑1 (MQ=255) cAAGTATCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGCCCATGCCAGCCCTg < 1:95256/139‑1 (MQ=255) tCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTAtt > 2:345519/1‑50 (MQ=255) tCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTAtt < 1:345519/50‑1 (MQ=255) tCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGt > 2:382646/1‑83 (MQ=255) tCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGt < 1:382646/83‑1 (MQ=255) tCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGCCCATGCCAGCCCTgcagca < 1:199848/138‑1 (MQ=255) tCCTGTGGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGCCCATGCCAGCCCTGCAGcat > 1:73269/1‑139 (MQ=255) gtgGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGCCCATGCCAGCCCTGCAGcatccat > 1:320084/1‑139 (MQ=255) tgGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGt > 2:119236/1‑78 (MQ=255) tgGAGAACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGt < 1:119236/78‑1 (MQ=255) gagaACCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGCCCATGCCAGCCCTGCAGCATCCATCt > 1:213440/1‑138 (MQ=255) aaCCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTgacg > 1:378317/1‑68 (MQ=255) aaCCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTgacg < 2:378317/68‑1 (MQ=255) aaCCCCCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGCCCATGCCAGCCCTGCAGCATCCATCTTATc > 2:268038/1‑139 (MQ=255) | TGGTAGGAATTGCCAGAATCGGTACACTGGGTTTATTGGTCGGGGAAAGCCCTTCCAGGCTACGCACATCGGCAAACTCCGGGTTGTTGCTGATAATGCCAATCGCTTTACAAGTATCCTGTGGAGAACCACCACCAATAGCGATCAGGTAATCCGCGCCGCTATTCTGGAATACACCGAGCCCTTCTTTGACGACAGTAATTGTTGGGTTGGGCACTACGCCGTCGTAAATCGCCCATGCCAGCCCTGCAGCATCCATCTTATC > NZ_CP009273/2925955‑2926219 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |