| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,322,128 | (C)5→4 | coding (1149/1650 nt) | yfaQ ← | YfaQ family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,322,124 | 0 | C | . | 100.0% | 101.0 / NA | 24 | coding (1153/1650 nt) | yfaQ | YfaQ family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (10/14); total (10/14) | |||||||||||
AACGCTCTCCCTGCCCCGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCGCCCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTGCTGTAAAAAAGTGCGAATCGCCACGGTCATGGCTTTCGCT > NZ_CP009273/2321992‑2322251 | aaCGCTCTCCCTGCCCCGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCGccccgtg > 1:229487/1‑136 (MQ=255)aaCGCTCTCCCTGCCCCGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCGccccgtg > 2:296534/1‑136 (MQ=255) tcCCTGCCCCGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTg > 1:116308/1‑139 (MQ=255) ccccGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAg < 1:296534/139‑1 (MQ=255) ccTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGa > 1:437013/1‑138 (MQ=255) ggCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAaca < 1:359188/138‑1 (MQ=255) gCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACg < 1:566898/139‑1 (MQ=255) gCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCg < 1:139241/138‑1 (MQ=255) gccAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCgctg < 2:229487/139‑1 (MQ=255) aGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGctgctg > 2:479761/1‑139 (MQ=255) gtgtCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCgggg < 1:359006/139‑1 (MQ=255) tgtCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGa < 2:437013/139‑1 (MQ=255) gTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCa < 1:368263/139‑1 (MQ=255) aaCCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGttt < 1:101630/138‑1 (MQ=255) cGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTGCt > 1:562894/1‑139 (MQ=255) gATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAg < 1:38315/68‑1 (MQ=255) gATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAg > 2:38315/1‑68 (MQ=255) gATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTGCTg > 2:439551/1‑138 (MQ=255) aTCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCg > 2:246254/1‑64 (MQ=255) aTCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCg < 1:246254/64‑1 (MQ=255) aTCCTGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTGCTGTAAAAAAGTGCGAATCGCCa < 2:562894/139‑1 (MQ=255) tGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGc < 2:145669/87‑1 (MQ=255) tGCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGc > 1:145669/1‑87 (MQ=255) gCGTCCAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTGCTGTAAAAAAGTGCGAATCGCCACGGt > 1:297969/1‑138 (MQ=255) cAGGCGGTCATCGTTCGCG‑CCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTGCTGTAAAAAAGTGCGAATCGCCACGGTCATGGc > 2:215197/1‑139 (MQ=255) tCATCGGTCGCG‑CCCCGTGGTCGCTGCCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTGGCTGTAAAAAAGTGCGAATCGCCACGGTCATGGCTTTCGCt < 2:476766/139‑1 (MQ=255) | AACGCTCTCCCTGCCCCGCCTGGGCCGTGGCTTGCCGCCAGGAAAGTGTCCCTTCGGTAGCGCGACTGCCATGATAATGAACCGGATCGCCTGCATAGATGAGATCCTGCGTCCAGGCGGTCATCGTTCGCGCCCCCGTGGTCGCTGGCGAAGCAGAAACACGCTGCGTGGCGCTGCTGTCGGGGATGGTCAGGCAATCGCCTTCCCGATTGGCGTTTTGCTGTAAAAAAGTGCGAATCGCCACGGTCATGGCTTTCGCT > NZ_CP009273/2321992‑2322251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |