Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 4,062,410 | G→T | P76Q (CCG→CAG) | yihQ ← | sulfoquinovosidase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 4,062,410 | 0 | G | T | 100.0% | 136.2 / NA | 34 | P76Q (CCG→CAG) | yihQ | sulfoquinovosidase |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (17/17); total (17/17) |
AAGGCGCAGCCAGATACGGTTGTGGTTAAGGTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCGGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATCCGCTATACCTGAGCCAATCCATAAACAAGGATTATCTTTGCTA > NZ_CP009273/4062274‑4062541 | aaGGCGCAGCCAGATACGGTTGTGGTTAAGGTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGt > 2:479059/1‑139 (MQ=255) aGGCGCAGCCAGATACGGTTGTGGTTAAGGTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGt > 1:463997/1‑138 (MQ=255) ccAGATACGGTTGTGGTTAAGGTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCt > 1:215104/1‑138 (MQ=255) aTACGGTTGTGGTTAAGGTTGTCGTTTTGTAGTTACAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGa > 1:177523/1‑139 (MQ=255) ttGTGGTTAAGGTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGt > 2:447700/1‑139 (MQ=255) gTTAAGGTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGt > 2:198279/1‑138 (MQ=255) aaGGTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAgc > 1:128294/1‑139 (MQ=255) aaGGTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAg < 2:215104/138‑1 (MQ=255) aGGTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAgcg < 2:41155/139‑1 (MQ=255) ggTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAgcg > 1:412314/1‑138 (MQ=255) gTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAAtt > 1:524340/1‑139 (MQ=255) aTCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAAt < 2:558367/137‑1 (MQ=255) ggCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACcgcg < 1:34387/138‑1 (MQ=255) ggCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCgg < 1:4519/139‑1 (MQ=255) cAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGat < 2:463997/138‑1 (MQ=255) aGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGata < 1:343212/138‑1 (MQ=255) aGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGata < 2:177523/138‑1 (MQ=255) cGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACcgcg < 1:133890/123‑1 (MQ=255) cGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACcgcg > 2:133890/1‑123 (MQ=255) cGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATcc > 2:304635/1‑139 (MQ=255) ggCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATCCGc > 1:229356/1‑138 (MQ=255) gcgcTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATCCGCt < 1:198786/138‑1 (MQ=255) cTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATCCGCTATAc < 1:125843/139‑1 (MQ=255) aaCCACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATCCGCTATACCTGAGCCAAt > 1:402100/1‑139 (MQ=255) cACGGCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATCCGCTATACCTGAGCCAATCCa < 2:93767/139‑1 (MQ=255) ggCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGata > 2:25009/1‑113 (MQ=255) ggCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGata < 1:25009/113‑1 (MQ=255) gCTGAAATGAATTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATCCGCTATACCTGAGCCAATCCATaaa < 2:127297/139‑1 (MQ=255) aaTTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGata > 2:149539/1‑103 (MQ=255) aaTTAACCAACCATCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGata < 1:149539/103‑1 (MQ=255) accaaccaTCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATCCGCTATACCTGAGCCAATCCATAAACAAGGATTATCttt > 2:235008/1‑139 (MQ=255) accaTCCTGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATCCGCTATACCTGAGCCAATCCATAAACAAGGATTATCTTTGCTa < 2:128294/139‑1 (MQ=255) ccaTCCTGTGACTGGCTGACGATGGCGTCGGTAAgcg > 2:365407/1‑37 (MQ=255) ccaTCCTGTGACTGGCTGACGATGGCGTCGGTAAgcg < 1:365407/37‑1 (MQ=255) | AAGGCGCAGCCAGATACGGTTGTGGTTAAGGTTGTCGTTTTGTAGTTCCAGCAATAAACGCCCCTGATCGTCGGCAGAGATATTCAGCGTGGCGCTAATGTCAGAACCACGGCTGAAATGAATTAACCAACCATCCGGTGACTGGCTGACGATGGCGTCGGTAAGCGCAATTTTCTCCTGTAGTTTATCTTTAATGCTGAAATTACCGCGGAACATATCGATATCCGCTATACCTGAGCCAATCCATAAACAAGGATTATCTTTGCTA > NZ_CP009273/4062274‑4062541 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |