| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,192,005 | A→G | E51G (GAA→GGA) | zraS → | two‑component system sensor histidine kinase ZraS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,192,005 | 0 | A | G | 100.0% | 110.3 / NA | 29 | E51G (GAA→GGA) | zraS | two‑component system sensor histidine kinase ZraS |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (14/15); total (14/15) | |||||||||||
AAGACTCCTTAGCTAAATGGTTAAGCGCGATCCTCCCCGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGAAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATGCACCATGTACAGCAACAGGCGCTTCTGGAAGAGATGGCGGGACAGCCGGGAGT > NZ_CP009273/4191876‑4192122 | aaGACTCCTTAGCTAAATGGTTAAGCGCGATCCTCCCCGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTa < 2:328851/138‑1 (MQ=255) tCCTTAGCTAAATGGTTAAGCGCGATCCTCCCCGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGc > 2:504974/1‑139 (MQ=255) tCCTTAGCTAAATGGTTAAGCGCGATCCTCCCCGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGc > 1:448662/1‑139 (MQ=255) tGGTTAAGCGCGATCCTCCCCGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGctc > 1:307116/1‑139 (MQ=255) ttAAGCGCGATCCTCCCCGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTg > 1:323174/1‑138 (MQ=255) cgcgATCCTCCCCGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCg > 2:315562/1‑139 (MQ=255) cccGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCcgcg < 1:363159/139‑1 (MQ=255) ggTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGgaaa > 2:423148/1‑93 (MQ=255) ggTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGgaaa < 1:423148/93‑1 (MQ=255) ggTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTa > 1:531051/1‑98 (MQ=255) ggTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTa < 2:531051/98‑1 (MQ=255) tCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAgggat < 2:307116/139‑1 (MQ=255) ttgttgGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAgggatggg < 1:504974/139‑1 (MQ=255) gtggGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAgggatgggga > 1:23337/1‑130 (MQ=255) gtggGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAgggatgggga < 2:23337/130‑1 (MQ=255) gtggGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAgggatggg < 1:28735/128‑1 (MQ=255) gtggGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAgggatggg > 2:28735/1‑128 (MQ=255) gtggGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAAt < 1:455578/137‑1 (MQ=255) gtggGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATg > 1:326119/1‑138 (MQ=255) tggGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATGCa < 2:323174/139‑1 (MQ=255) ttGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATGCACCATg < 1:187979/139‑1 (MQ=255) ttGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATGCACCATGTa > 1:463411/1‑137 (MQ=255) tgATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATGCACCATGTACAGCAACAGgcgc < 2:448662/138‑1 (MQ=255) ttATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAg > 2:100411/1‑81 (MQ=255) ttATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAg > 2:304297/1‑81 (MQ=255) ttATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAg < 1:100411/81‑1 (MQ=255) ttATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAg < 1:304297/81‑1 (MQ=255) ggCAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATGCACCATGTACAGCAACAGGCGCTTCTGGAAGAGATGGCGGGACAGCCGGGa < 2:463411/139‑1 (MQ=255) cAGACCGCCAGGCATTACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATGCACCATGTACAGCAACAGGCGCTTCTGGAAGAGATGGCGGGACAGCCGGGAgt > 2:288908/1‑139 (MQ=255) tACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGa > 2:313103/1‑44 (MQ=255) tACTGGGAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGa < 1:313103/44‑1 (MQ=255) | AAGACTCCTTAGCTAAATGGTTAAGCGCGATCCTCCCCGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGAAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATGCACCATGTACAGCAACAGGCGCTTCTGGAAGAGATGGCGGGACAGCCGGGAGT > NZ_CP009273/4191876‑4192122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |