Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 1,695,442 | T→G | F77V (TTT→GTT) | malY → | bifunctional maltose regulon transcriptional repressor/cystathionine beta‑lyase MalY |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 1,695,442 | 0 | T | G | 100.0% | 80.9 / NA | 22 | F77V (TTT→GTT) | malY | bifunctional maltose regulon transcriptional repressor/cystathionine beta‑lyase MalY |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (8/14); total (8/14) |
CACGATTTCAGACATGGATTTTGCCACTGCCCCCTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGTTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTATATGGTTTCAGAACTGATTCGTCAGTGGTCTGAAACAGGTGAAGGCG > NZ_CP009273/1695312‑1695553 | cACGATTTCAGACATGGATTTTGCCACTGCCCCCTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCAcc > 2:533363/1‑139 (MQ=255) aCGATTTCAGACATGGATTTTGCCACTGCCCCCTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCAcc < 2:290903/138‑1 (MQ=255) tGCCACTGCCCCCTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGa < 2:485775/138‑1 (MQ=255) cTGCCCCCTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAg > 2:137695/1‑116 (MQ=255) cTGCCCCCTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAg < 1:137695/116‑1 (MQ=255) cTGCCCCCTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCa < 1:114102/139‑1 (MQ=255) cccccTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGATTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGa < 1:424327/138‑1 (MQ=255) cccTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACgg < 2:181710/139‑1 (MQ=255) gcgcTGAATCAGCCCCTGATGCACGGCGTATTCGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGACTTTCAGACGGTGGGGTATGGCCCtt > 2:393929/1‑139 (MQ=255) gcTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCt < 1:11023/139‑1 (MQ=255) cgcCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCAcc > 1:392736/1‑81 (MQ=255) cgcCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCAcc < 2:392736/81‑1 (MQ=255) gCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTATATGGTTTCAGAACTGATTCGTCa < 2:341446/139‑1 (MQ=255) cTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTATATGGTTTCAGAACTGATTCGTCAg < 1:551079/139‑1 (MQ=255) aGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTatat > 2:438315/1‑113 (MQ=255) aGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTatat < 1:438315/113‑1 (MQ=255) ccGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTATATGGTTTCAGAACTGATTCGTCAGTGGTCt > 1:241084/1‑139 (MQ=255) ccGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTATATGGTTTCAGAACTGATTCGTCAGTGGTCt > 1:441215/1‑139 (MQ=255) aCGATGAGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTATATGGTTTCAGAACTGATTCGTCAGTGGTCTGAAACAGGTGa < 2:273369/139‑1 (MQ=255) aGTTTCTCGCGGCTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTATATGGTTTCAGAACTGATTCGTCAGTGGTCTGAAACAGGTGAAGGCg < 1:73125/138‑1 (MQ=255) cTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGa < 2:280545/51‑1 (MQ=255) cTATTGCCCACTGGGTTTCCACCCAGCATTACACCGCCATCGATTCTCAGa > 1:280545/1‑51 (MQ=255) | CACGATTTCAGACATGGATTTTGCCACTGCCCCCTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGTTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTATATGGTTTCAGAACTGATTCGTCAGTGGTCTGAAACAGGTGAAGGCG > NZ_CP009273/1695312‑1695553 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |