| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,919,822 | T→C | F42F (TTT→TTC) | yobB → | carbon‑nitrogen hydrolase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,919,822 | 0 | T | C | 100.0% | 125.8 / NA | 32 | F42F (TTT→TTC) | yobB | carbon‑nitrogen hydrolase family protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (15/17); total (15/17) | |||||||||||
GTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTTCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGT > NZ_CP009273/1919691‑1919953 | gTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGc < 1:216025/139‑1 (MQ=255) aTGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGctttct < 1:169385/138‑1 (MQ=255) gcAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTa > 1:293448/1‑115 (MQ=255) gcAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTa < 2:293448/115‑1 (MQ=255) cTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGc < 1:123933/139‑1 (MQ=255) gTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGc > 1:129462/1‑127 (MQ=255) gTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGc < 2:129462/127‑1 (MQ=255) gTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGccc > 2:379896/1‑138 (MQ=255) ccTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGa < 1:379896/139‑1 (MQ=255) acCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGAtctctc < 1:462754/137‑1 (MQ=255) atcatcTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGa < 1:526370/82‑1 (MQ=255) atcatcTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGa > 2:526370/1‑82 (MQ=255) atcTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACt > 2:296913/1‑70 (MQ=255) atcTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACt < 1:296913/70‑1 (MQ=255) tgtgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGat < 1:349660/70‑1 (MQ=255) tgtgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGat > 2:349660/1‑70 (MQ=255) tgtgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCtt > 1:452780/1‑88 (MQ=255) tgtgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCtt < 2:452780/88‑1 (MQ=255) tgtgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCg < 2:439370/101‑1 (MQ=255) tgtgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCg > 1:439370/1‑101 (MQ=255) tgtgAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAAc > 1:116072/1‑138 (MQ=255) ccgccgccAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGc > 1:510371/1‑138 (MQ=255) ccgccAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGa > 2:152961/1‑68 (MQ=255) ccgccAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGa < 1:152961/68‑1 (MQ=255) ccgccAGGCAACAATGTCAGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAAt > 2:438069/1‑139 (MQ=255) aGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGc > 1:316000/1‑55 (MQ=255) aGCTGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGc < 2:316000/55‑1 (MQ=255) tGTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTcc > 2:568509/1‑139 (MQ=255) gTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGAtctctc > 2:229081/1‑75 (MQ=255) gTTAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGAtctctc < 1:229081/75‑1 (MQ=255) ttAGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCg < 2:190294/139‑1 (MQ=255) aGTTTTCCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGt < 1:568509/138‑1 (MQ=255) | GTCATTATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTTCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGT > NZ_CP009273/1919691‑1919953 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |