Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP009273	1,982,130	G→A	intergenic (+104/‑67)	yecR → / → ftnA	YecR‑like lipofamily protein/non‑heme ferritin

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP009273	1,982,130	0	G	A	100.0%	29.2 / NA	9	intergenic (+104/‑67)	yecR/ftnA	YecR‑like lipofamily protein/non‑heme ferritin
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (3/6);  total (3/6)

TGCCATCATTCCGCCTTCCCTGTCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTGCAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTTGTGGAG  >  NZ_CP009273/1981994‑1982189                                                                                                                                         |                                                            tGCCATCATTCCGCCTTCCCTGTCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACa                                                           <  1:345625/139‑1 (MQ=255)  gCCATCATTCCGCCTTCCCTGTCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACa                                                           >  1:230633/1‑138 (MQ=255)  gCCATCATTCCGCCTTCCCTGTCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACa                                                           >  2:510783/1‑138 (MQ=255)                                             agagAGTGGATTCTCGATGATTAAAGAAATAGCGGTACTGCGTTTTATTCACATTTGTATTTTTAATAATTCAAGTTTATATTTTACCTTTGACATATAATCACATAACAAATTATAGTGCCGCCAAATCAACAAatat               <  2:254859/136‑1 (MQ=255)                                             aGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAatat               <  1:418189/139‑1 (MQ=255)                                                gAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAAc            <  2:203671/139‑1 (MQ=255)                                                           cGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTTGTGGAg  <  2:230633/138‑1 (MQ=255)                                                                                                                                 tACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTtgtg     >  1:165690/1‑65 (MQ=255)                                                                                                                                 tACCTTTTACAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTtgtg     <  2:165690/65‑1 (MQ=255)                                                                                                                                         |                                                            TGCCATCATTCCGCCTTCCCTGTCTTTCTCTAAATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAATTGAAGTTTATATTTTACCTTTTGCAAATAATAAAATAACAAATTATAGTGACGCCACAGCAACAAATATAACCTTTGTGGAG  >  NZ_CP009273/1981994‑1982189

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑