Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP009273	3,000,345	(A)5→4	coding (722/1188 nt)	ygeW →	knotted carbamoyltransferase YgeW

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP009273	3,000,341	0	A	.	100.0%	338.4 / NA	76	coding (718/1188 nt)	ygeW	knotted carbamoyltransferase YgeW
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (38/38);  total (38/38)

ACTCTCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAAGAGCGTACTGAATTGC  >  NZ_CP009273/3000210‑3000473                                                                                                                                    |                                                                                                                                     aCTCTCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGaaaacaat                                                                                                                               >  2:2499/1‑135 (MQ=255) aCTCTCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGaaaacaat                                                                                                                               >  1:315120/1‑135 (MQ=255)  ctctCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATg                                                                                                                             >  2:681934/1‑139 (MQ=255)  ctctCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATg                                                                                                                             >  1:610076/1‑139 (MQ=255)  ctctCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATg                                                                                                                             >  1:716203/1‑139 (MQ=255)       cAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTa                                                                                                                          <  1:13745/137‑1 (MQ=255)        aaGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAg                                                                                                                       <  2:148924/139‑1 (MQ=255)               ggCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCgg                                                                                                                >  1:250966/1‑139 (MQ=255)               ggCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCgg                                                                                                                >  2:143458/1‑139 (MQ=255)                    aCCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCggtgg                                                                                                             >  2:274469/1‑137 (MQ=255)                    aCCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCggtgg                                                                                                             >  2:600542/1‑137 (MQ=255)                       gCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCt                                                                                                        <  1:328416/139‑1 (MQ=255)                        ctctctGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCtt                                                                                                       >  2:633688/1‑139 (MQ=255)                               tACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAg                                                                                                <  1:274469/139‑1 (MQ=255)                                    caAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCAc                                                                                           <  2:255050/139‑1 (MQ=255)                                    caAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCAc                                                                                           <  2:58350/139‑1 (MQ=255)                                     aaGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCAc                                                                                           >  2:507919/1‑138 (MQ=255)                                       ggCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAg                                                                                        >  2:130707/1‑139 (MQ=255)                                       ggCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAg                                                                                        >  2:374699/1‑139 (MQ=255)                                       ggCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAg                                                                                        >  2:26109/1‑139 (MQ=255)                                       ggCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAg                                                                                        >  2:606873/1‑139 (MQ=255)                                       ggCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAg                                                                                        >  2:648246/1‑139 (MQ=255)                                       ggCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAg                                                                                        >  1:172139/1‑139 (MQ=255)                                        gCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGc                                                                                       <  2:250966/139‑1 (MQ=255)                                         catcatCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCa                                                                                      >  1:489314/1‑139 (MQ=255)                                         catcatCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCa                                                                                      <  1:407561/139‑1 (MQ=255)                                         catcatCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCa                                                                                      >  1:349110/1‑139 (MQ=255)                                         catcatCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGGGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCa                                                                                      >  1:369999/1‑139 (MQ=255)                                            catcGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCAc                                                                                           >  2:70018/1‑131 (MQ=255)                                            catcGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCAc                                                                                           <  1:70018/131‑1 (MQ=255)                                            catcGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATg                                                                                    >  1:12410/1‑138 (MQ=255)                                              tcGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATgg                                                                                   >  2:587093/1‑137 (MQ=255)                                                 gTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGgaagaa                                                                              <  1:633688/139‑1 (MQ=255)                                                  tCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGaagaag                                                                             >  2:413598/1‑139 (MQ=255)                                                            cGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGa                                                                   >  1:670929/1‑139 (MQ=255)                                                                   gTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGAc                                                            <  1:695370/139‑1 (MQ=255)                                                                   gTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGAc                                                            <  1:29436/139‑1 (MQ=255)                                                                            tCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTAt                                                   >  1:270100/1‑139 (MQ=255)                                                                              aCCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCAc                                                                                           >  1:320887/1‑97 (MQ=255)                                                                              aCCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCAc                                                                                           <  2:320887/97‑1 (MQ=255)                                                                              aCCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGa                                                                   >  2:495602/1‑121 (MQ=255)                                                                              aCCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGa                                                                   <  1:495602/121‑1 (MQ=255)                                                                              aCCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGACTCCGGTGGTAGCTTCCGTCAGGTCACCCGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTTTcc                                                 >  2:406840/1‑139 (MQ=255)                                                                               cccTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCg                                                <  2:633934/139‑1 (MQ=255)                                                                                 cTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGaa                                              <  1:648246/139‑1 (MQ=255)                                                                                   ggCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACg                                                                 >  1:473196/1‑118 (MQ=255)                                                                                   ggCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACg                                                                 <  2:473196/118‑1 (MQ=255)                                                                                   ggCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGt                                            >  1:705407/1‑139 (MQ=255)                                                                                    gCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGt                                                                                                   >  1:69376/1‑83 (MQ=255)                                                                                    gCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGt                                                                                                   <  2:69376/83‑1 (MQ=255)                                                                                    gCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAg                                             <  1:507919/137‑1 (MQ=255)                                                                                         tCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCa                                                                                      <  2:504361/91‑1 (MQ=255)                                                                                         tCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCa                                                                                      >  1:504361/1‑91 (MQ=255)                                                                                         tCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATggg                                      >  2:481905/1‑139 (MQ=255)                                                                                         tCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATggg                                      >  1:33617/1‑139 (MQ=255)                                                                                           cGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGc                                     <  2:349110/138‑1 (MQ=255)                                                                                           cGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGc                                     <  2:270100/138‑1 (MQ=255)                                                                                           cGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGc                                     <  2:670929/138‑1 (MQ=255)                                                                                           cGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGc                                     <  1:130707/138‑1 (MQ=255)                                                                                               aGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCtt                                <  1:481905/139‑1 (MQ=255)                                                                                                     cGACCTGATCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACaa                            <  2:12410/137‑1 (MQ=255)                                                                                                            aTCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATgg                    >  1:657450/1‑138 (MQ=255)                                                                                                            aTCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATgg                    <  1:600542/138‑1 (MQ=255)                                                                                                             tCCCGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGaa                  <  2:369999/139‑1 (MQ=255)                                                                                                               ccGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAaga                <  2:716203/139‑1 (MQ=255)                                                                                                               ccGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAaga                <  2:620188/139‑1 (MQ=255)                                                                                                               ccGGATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAaga                <  1:413598/139‑1 (MQ=255)                                                                                                                  gATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAaga                >  2:317726/1‑136 (MQ=255)                                                                                                                  gATGTGGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAaga                <  1:317726/136‑1 (MQ=255)                                                                                                                    tgtgGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAAGAGCGTa           <  1:374699/139‑1 (MQ=255)                                                                                                                      tgGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAg                                                                                                >  2:73158/1‑52 (MQ=255)                                                                                                                      tgGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAg                                                                                                <  1:73158/52‑1 (MQ=255)                                                                                                                      tgGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCa                                                                       <  2:683311/77‑1 (MQ=255)                                                                                                                      tgGTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCa                                                                       >  1:683311/1‑77 (MQ=255)                                                                                                                        gTTGAAGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAAGAGCGTACTg        >  1:433444/1‑138 (MQ=255)                                                                                                                            aaGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAAGAGCGTACTGAATtg   <  1:475251/139‑1 (MQ=255)                                                                                                                            aaGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAAGAGCGTACTGAATtg   <  2:489314/139‑1 (MQ=255)                                                                                                                             aGTGGCG‑AAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAAGAGCGTACTGAATtgc  <  2:705407/139‑1 (MQ=255)                                                                                                                                    |                                                                                                                                     ACTCTCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAAGAGCGTACTGAATTGC  >  NZ_CP009273/3000210‑3000473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑