| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,211,818 | A→C | C73W (TGT→TGG) | yehY ← | glycine betaine ABC transporter permease YehY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,211,818 | 0 | A | C | 100.0% | 95.7 / NA | 25 | C73W (TGT→TGG) | yehY | glycine betaine ABC transporter permease YehY |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (15/10); total (15/10) | |||||||||||
GCCAGAAACCACTGCCGAGGCTGGTACGCGCCAGCGCACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCACAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACGCCCACCAGCATCCAGATCGTTTGCGGCCACAGCTGCCAGAGATGACGCCCCTCACCCGAAACTAAACGATTAGGCGCG > NZ_CP009273/2211697‑2211953 | gccagAAACCACTGCCGAGGCTGGTACGCGCCAGCGCACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCTCCCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCttttt > 2:444216/1‑139 (MQ=255) agAAACCACTGCCGAGGCTGGTACGCGCCAGCGCACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTAcc < 1:526497/139‑1 (MQ=255) cTGCCGAGGCTGGTACGCGCCAGCGCACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATaa < 1:551219/139‑1 (MQ=255) gCTGGTACGCGCCAGCGCACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGcc > 1:617484/1‑139 (MQ=255) ggTACGCGCCAGCGCACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCg < 1:286075/137‑1 (MQ=255) ggTACGCGCCAGCGCACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCg > 2:286075/1‑137 (MQ=255) ggTACGCGCCAGCGCACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGt > 1:588271/1‑138 (MQ=255) tACGCGCCAGCGCACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCTCCCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGt > 1:336602/1‑137 (MQ=255) cgcACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCTCCCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGgcgc > 2:417086/1‑138 (MQ=255) tGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTAcc > 2:593156/1‑103 (MQ=255) tGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTAcc < 1:593156/103‑1 (MQ=255) ccATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCCACCAACGc > 2:23479/1‑139 (MQ=255) ccATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACg < 1:390052/138‑1 (MQ=255) aTTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCTCCCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACGcc < 1:444216/139‑1 (MQ=255) tGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACGCccacc < 2:617484/138‑1 (MQ=255) tGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACGCccac > 1:247939/1‑137 (MQ=255) cgcCAGTTGGGTCGCCGCCTTTCCAGCTCCCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACGCCCACCAg < 1:417086/139‑1 (MQ=255) cgcCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACGCCCACCAg > 2:532558/1‑138 (MQ=255) ccAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCa < 2:124041/115‑1 (MQ=255) ccAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCa > 1:124041/1‑115 (MQ=255) cccACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACGCCCACCAGCATCCAGATCGTTTGCGGCCACAGCTGc > 2:556130/1‑137 (MQ=255) cGAAGACGAATTGCGCCAGAATGAGTGCCCAAAtgct < 2:270009/37‑1 (MQ=255) cGAAGACGAATTGCGCCAGAATGAGTGCCCAAAtgct > 1:270009/1‑37 (MQ=255) aGTGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACGCCCACCAGCATCCAGATCGTGTGCGGCCACAGCTGCCAGAGATGACGCCCCTCACCCGAAACTAACCGATTAGgcg > 2:339066/1‑139 (MQ=255) tGCCCAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACGCCCACCAGCATCCAGATCGTTTGCGGCCACAGCTGCCAGAGATGACGCCCCTCACCCGAAACTAAACGATTAGGcgcg > 2:742493/1‑139 (MQ=255) | GCCAGAAACCACTGCCGAGGCTGGTACGCGCCAGCGCACTGCCATTTTGCGCCAGTTGGGTCGCCGCCTTTCCAGCT‑CCCCACACCAGCAATACGAAGACGAATTGCGCCAGAATGAGTGCACAAATGCTGCCTTTTTTACCGGGAATAAAACAGGCCGTCAGCCAGGCGCAACCAACGCCCACCAGCATCCAGATCGTTTGCGGCCACAGCTGCCAGAGATGACGCCCCTCACCCGAAACTAAACGATTAGGCGCG > NZ_CP009273/2211697‑2211953 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |