Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP009273 4,423,077 A→C G255G (GGT→GGG)  qorB ← NAD(P)H:quinone oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092734,423,0770AC100.0% 117.0 / NA 32G255G (GGT→GGG) qorBNAD(P)H:quinone oxidoreductase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (18/14);  total (18/14)

AGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCTTCGCTCAGATTTTGATAGGTAACCTGTTTGCCGC  >  NZ_CP009273/4422950‑4423204
                                                                                                                               |                                                                                                                               
agagGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGa                                                                                                                      <  1:257492/139‑1 (MQ=255)
     aTGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATgcgc                                                                                                                 >  2:325878/1‑139 (MQ=255)
        cGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCaa                                                                                                              >  1:404197/1‑139 (MQ=255)
            aggaTGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGt                                                                                                           >  2:115123/1‑138 (MQ=255)
                tGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGaa                                                                                                      >  2:181744/1‑139 (MQ=255)
                        taattaaCTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCa                                                                                               <  1:325878/138‑1 (MQ=255)
                                   ttattaACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCa                                                                                   <  2:734310/139‑1 (MQ=255)
                                   ttattaACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCa                                                                                   <  2:346811/139‑1 (MQ=255)
                                    tattaACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAg                                                                                  >  1:751729/1‑139 (MQ=255)
                                          cATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGcc                                                                                                                            <  1:118692/91‑1 (MQ=255)
                                          cATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGcc                                                                                                                            >  2:118692/1‑91 (MQ=255)
                                            ttAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCgg                                                                          >  1:446657/1‑139 (MQ=255)
                                             tAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGcc                                                                                                                >  1:217293/1‑100 (MQ=255)
                                             tAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGcc                                                                                                                <  2:217293/100‑1 (MQ=255)
                                                  aGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTc                                                                    <  1:651888/139‑1 (MQ=255)
                                                                  cGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGc                                                    >  1:710704/1‑139 (MQ=255)
                                                                             gTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAAt                                         >  1:339222/1‑139 (MQ=255)
                                                                                   gggTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCt                                    <  2:404197/138‑1 (MQ=255)
                                                                                        gCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACg                                                               >  1:677387/1‑106 (MQ=255)
                                                                                        gCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACg                                                               <  2:677387/106‑1 (MQ=255)
                                                                                        gCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCTTCGCt                               >  2:224241/1‑138 (MQ=255)
                                                                                        gCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCTTCGCt                               >  1:290140/1‑138 (MQ=255)
                                                                                        gCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCTTCGCt                               >  1:694873/1‑138 (MQ=255)
                                                                                                 tttGCTAAGTGTTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCTTCGCTCAGATTTTGa                     <  1:617903/139‑1 (MQ=255)
                                                                                                         gtgtTTTGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCTTCGCTCAGATTTTGATAGGTAAc             <  1:224241/139‑1 (MQ=255)
                                                                                                               tGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCt                                    >  1:455314/1‑110 (MQ=255)
                                                                                                               tGCTGTCATCAAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCt                                    <  2:455314/110‑1 (MQ=255)
                                                                                                                    tcatcaAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCTTCGCTCAGATTTTGa                     <  1:309361/120‑1 (MQ=255)
                                                                                                                    tcatcaAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCTTCGCTCAGATTTTGa                     >  2:309361/1‑120 (MQ=255)
                                                                                                                    tcatcaAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCTTCGCTCAGATTTTGATAGGTAACCTGTTTGCCGc  >  1:555441/1‑139 (MQ=255)
                                                                                                                      atcaAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCggg                                                                         <  2:234865/66‑1 (MQ=255)
                                                                                                                      atcaAACAGCCCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCggg                                                                         >  1:234865/1‑66 (MQ=255)
                                                                                                                               |                                                                                                                               
AGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCGGGCAGTCCGACGCTTTTCAGTGCCGCGGCGAAATCGGCTTCGCTCAGATTTTGATAGGTAACCTGTTTGCCGC  >  NZ_CP009273/4422950‑4423204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑