| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 634,370 | A→C | intergenic (‑341/‑31) | dsbG ← / → ahpC | thiol:disulfide interchange protein DsbG/alkyl hydroperoxide reductase subunit C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 634,370 | 0 | A | C | 100.0% | 104.6 / NA | 27 | intergenic (‑341/‑31) | dsbG/ahpC | thiol:disulfide interchange protein DsbG/alkyl hydroperoxide reductase subunit C |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (12/15); total (12/15) | |||||||||||
AGGGGGCCATTTTACTTTTTATCGCCGCTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTACATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAATCACCGAAAAAGATACCGAAGGCCGCTGGAGCG > NZ_CP009273/634237‑634503 | aGGGGGCCATTTTACTTTTTATCGCCGCTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCAtct > 2:237654/1‑139 (MQ=255) ggggCCATTTTACTTTTTATCGCCGCTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCa > 2:572228/1‑139 (MQ=255) ggCCATTTTACTTTTTATCGCCGCTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATc > 2:478413/1‑139 (MQ=255) cTTTTTATCGCCGCTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACgg < 2:704609/139‑1 (MQ=255) tttATCGCCGCTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACgg < 2:468323/136‑1 (MQ=255) ttATCGCCGCTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACggagg < 1:433143/138‑1 (MQ=255) ttATCGCCGCTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACggagg < 1:692991/138‑1 (MQ=255) ccgcTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGta > 1:369106/1‑137 (MQ=255) gcTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGa < 2:769554/139‑1 (MQ=255) cacaAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAacac > 2:744010/1‑138 (MQ=255) gTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGaaaa < 1:123466/85‑1 (MQ=255) gTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGaaaa > 2:123466/1‑85 (MQ=255) gTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAAcc < 2:92969/138‑1 (MQ=255) tCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTa < 1:742345/108‑1 (MQ=255) tCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTa > 2:742345/1‑108 (MQ=255) ttGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACggagg > 1:648635/1‑70 (MQ=255) ttGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACggagg < 2:648635/70‑1 (MQ=255) gATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTTCCTTCCATCTCATCGAAAACACGGAGGaa < 2:438223/70‑1 (MQ=255) gATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGaa > 1:438223/1‑70 (MQ=255) tGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCg > 1:560672/1‑138 (MQ=255) aaaCGCATTAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAAt < 2:560672/139‑1 (MQ=255) ttAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAATCACCGaa < 2:224385/139‑1 (MQ=255) tAGCCGAATCGGCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAATCACCGaa > 1:312777/1‑138 (MQ=255) gCAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAATCACCGAAAAAGATACCGaa < 2:6070/139‑1 (MQ=255) cAAAAATTGGTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAATCACCGAAAAAGATACCGAAg > 2:410005/1‑139 (MQ=255) gTTACCTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAATCACCGAAAAAGATACCGAAGGCCGCTGGa < 1:572228/139‑1 (MQ=255) ccTTCCATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAATCACCGAAAAAGATACCGAAGGCCGCTGGAGCg < 1:478413/138‑1 (MQ=255) | AGGGGGCCATTTTACTTTTTATCGCCGCTGGCGGTGCAAAGTTCACAAAGTTGTCTTACGAAGGTTGTAAGGTAAAACTTATCGATTTGATAATGGAAACGCATTAGCCGAATCGGCAAAAATTGGTTACCTTACATCTCATCGAAAACACGGAGGAAGTATAGATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAATCACCGAAAAAGATACCGAAGGCCGCTGGAGCG > NZ_CP009273/634237‑634503 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |