| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,199,449 | A→C | intergenic (+168/‑8) | ymfL → / → BW25113_RS23635 | protein YmfL/DUF4222 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,199,449 | 0 | A | C | 100.0% | 93.5 / NA | 26 | intergenic (+168/‑8) | ymfL/BW25113_RS23635 | protein YmfL/DUF4222 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (16/10); total (16/10) | |||||||||||
CTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGACAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTACCTCCGCGAAGGTTATGAGCATGA > NZ_CP009273/1199314‑1199569 | cTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAg < 1:302230/139‑1 (MQ=255) ccTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGAc < 2:135513/138‑1 (MQ=255) ggTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCg > 1:414216/1‑139 (MQ=255) gTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGaa < 2:42088/128‑2 (MQ=255) gTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGAc > 1:42088/1‑128 (MQ=255) tGAATGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCa > 2:761317/1‑137 (MQ=255) aaTGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGt > 1:699427/1‑139 (MQ=255) aCCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTc > 2:662271/1‑139 (MQ=255) gTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTgg > 1:178579/1‑139 (MQ=255) aGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGcc > 1:647737/1‑139 (MQ=255) tAACCCGCAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAAcaca < 2:482859/138‑1 (MQ=255) ccACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACggg < 2:414216/139‑1 (MQ=255) cTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATc > 2:140701/1‑138 (MQ=255) tGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCaga > 1:408086/1‑99 (MQ=255) tGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCaga < 2:408086/99‑1 (MQ=255) cAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTACCTc > 2:344814/1‑139 (MQ=255) tGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGc < 1:678878/108‑1 (MQ=255) tGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGc > 2:678878/1‑108 (MQ=255) tGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGCAACACAACGGGTTATCTACCTCcgcg > 2:572922/1‑138 (MQ=255) ggCTGTGGGTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTACCTCCGCGAAg > 2:329355/1‑139 (MQ=255) gggTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTACCTCcgcg > 1:362755/1‑130 (MQ=255) gggTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTACCTCcgcg < 2:362755/130‑1 (MQ=255) gggTGATTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTACCTCCGCGAAGGTTAt > 1:272300/1‑138 (MQ=255) aTTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTa < 2:203390/41‑1 (MQ=255) aTTTCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTa > 1:203390/1‑41 (MQ=255) tCAACCGGCAGAAGGAGCCAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTACCTCCGCGAAGGTTATGAGCATGa < 2:272300/138‑1 (MQ=255) | CTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGACAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTACCTCCGCGAAGGTTATGAGCATGA > NZ_CP009273/1199314‑1199569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |