| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,624,590 | T→C | D194G (GAC→GGC) | ydfI ← | mannitol dehydrogenase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,624,590 | 0 | T | C | 100.0% | 111.9 / NA | 32 | D194G (GAC→GGC) | ydfI | mannitol dehydrogenase family protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (16/16); total (16/16) | |||||||||||
TTCGATTTTCGCCAGCGTATCCTCTGTCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGTCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTG > NZ_CP009273/1624457‑1624714 | ttCGATTTTCGCCAGCGTATCCTCTGTCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACg > 2:556790/1‑138 (MQ=255) ttttCGCCAGCGTATCCTCTGTCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATaa > 2:237930/1‑138 (MQ=255) ctctGTCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGc < 1:237930/139‑1 (MQ=255) tCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCAtg < 2:182026/137‑1 (MQ=255) caATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCacatgacat < 2:458175/139‑1 (MQ=255) gTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGGGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGt > 2:119870/1‑138 (MQ=255) tCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACg < 1:251358/92‑1 (MQ=255) tCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACg > 2:251358/1‑92 (MQ=255) ccaccaTTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACg > 2:489282/1‑91 (MQ=255) ccaccaTTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACg < 1:489282/91‑1 (MQ=255) accaTTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACg > 2:439027/1‑89 (MQ=255) accaTTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACg < 1:439027/89‑1 (MQ=255) accaTTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATg > 1:632502/1‑139 (MQ=255) ttgATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACg > 2:701719/1‑82 (MQ=255) ttgATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACg < 1:701719/82‑1 (MQ=255) ttgATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAg > 1:646089/1‑139 (MQ=255) aGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCt > 1:176386/1‑139 (MQ=255) ttCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCAtg < 1:294381/85‑1 (MQ=255) ttCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCAtg > 2:294381/1‑85 (MQ=255) gATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAg < 2:575459/138‑1 (MQ=255) aTCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAgcg > 2:706519/1‑139 (MQ=255) cATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCt < 2:747281/139‑1 (MQ=255) aTTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCt > 1:517409/1‑138 (MQ=255) aTTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTc < 2:548105/139‑1 (MQ=255) aTTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTc < 2:646089/139‑1 (MQ=255) ccAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAAt < 2:176386/139‑1 (MQ=255) tgCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAAt > 2:22265/1‑117 (MQ=255) tgCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAAt < 1:22265/117‑1 (MQ=255) tgCGTAGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCgg < 2:103293/138‑1 (MQ=255) aGGAAGTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCtggtg > 1:693951/1‑139 (MQ=255) gTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACgg < 2:652801/87‑1 (MQ=255) gTGACAACGCCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACgg > 1:652801/1‑87 (MQ=255) | TTCGATTTTCGCCAGCGTATCCTCTGTCACTGCGGGCACAATACGGTCCACCATTGTTGATGGGAAAGTCACGTTATCTTCGATCCATTGTGCCAGTTTTACATCAACGGCTTGTGCGTAGGAAGTGACAACGTCACGCATAACATGACCGTTTTCTGGCATGTTGTCACATGACATGACGGTAAATGCGGGAAGTCCTGCCGCTTTACGGCGAGCCAGCGCCTCAACAATCACCCCTGTTGCTGTTTTCGGCTGGTG > NZ_CP009273/1624457‑1624714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |