| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,676,053 | T→G | T18P (ACC→CCC) | yphG ← | DUF5107 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,676,053 | 0 | T | G | 100.0% | 81.8 / NA | 23 | T18P (ACC→CCC) | yphG | DUF5107 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (10/13); total (10/13) | |||||||||||
CACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCG > NZ_CP009273/2675920‑2676183 | cacaCCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCAt < 2:136746/139‑1 (MQ=255) cTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCggg < 2:279598/139‑1 (MQ=255) cGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCca > 1:117504/1‑121 (MQ=255) cGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCca < 2:117504/121‑1 (MQ=255) tCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATg > 2:321091/1‑137 (MQ=255) tCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATg < 1:321091/137‑1 (MQ=255) gCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGccc < 1:246849/139‑1 (MQ=255) ccGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCt < 1:550431/139‑1 (MQ=255) aaCCGCGCCGGACGATCCCTGATAAACTCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAAc < 1:55352/138‑1 (MQ=255) aaCCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAAc > 1:375142/1‑138 (MQ=255) gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCacac < 2:42588/99‑1 (MQ=255) gcCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCacac > 1:42588/1‑99 (MQ=255) aCGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTtgt > 1:362825/1‑139 (MQ=255) cgcgATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCcac > 2:239667/1‑77 (MQ=255) cgcgATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCcac < 1:239667/77‑1 (MQ=255) cgcgATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTtgtg < 1:399006/139‑1 (MQ=255) cgcgATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTtgtg > 2:214879/1‑139 (MQ=255) gATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCa < 1:214879/139‑1 (MQ=255) gATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCa < 2:362825/139‑1 (MQ=255) gATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCa < 2:375142/139‑1 (MQ=255) tGGGATGTATATCCTGCGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATc > 1:205501/1‑139 (MQ=255) cGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTcgcg > 2:304902/1‑139 (MQ=255) cGGCCCGGGTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTcgcg > 2:394794/1‑139 (MQ=255) | CACACCGCCTGCCAGGATTTCAGGGTTTTCTGCTCGCTCAGCGTATCGGTCACGCCGTAGGGATAAACCGCGCCGGACGATCCCTGATAAACGCGATTTTCCAGGAACATGGGATGTATATCCTGCGGCCCGGTTTCATAGGTCGGGATCTCAACGCGCTCTTGCCACACTTTTACTGGAGTCATGGTGCCCTCAATATTAACAAGACATACTGAATTAAAAGATTTGTGGCAGTGTATTGAACAATCTGGCAATGTTTTCGCG > NZ_CP009273/2675920‑2676183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |