Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 384,326 | A→C | G286G (GGT→GGG) | hemB ← | porphobilinogen synthase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 384,326 | 0 | A | C | 100.0% | 70.1 / NA | 20 | G286G (GGT→GGG) | hemB | porphobilinogen synthase |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (8/12); total (8/12) |
GAGGAAACAAAATTAACGCAGAATCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCACCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTACGCTCCAGCAGGTTTAACCATCAGGCAGTC > NZ_CP009273/384197‑384460 | gagGAAACAAAATTAACGCAGAATCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAgc > 1:246778/1‑139 (MQ=255) agGAAACAAAATTAACGCAGAATCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAgcg > 1:626835/1‑139 (MQ=255) aCAAAATTAACGCAGAATCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCgcggcg < 2:26364/139‑1 (MQ=255) gCAGAATCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAatcat < 1:489165/139‑1 (MQ=255) aGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCg < 2:311637/136‑1 (MQ=255) aGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCg < 2:192853/136‑1 (MQ=255) gcacGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCt > 2:179124/1‑139 (MQ=255) aaTCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTcacgca < 2:457287/137‑1 (MQ=255) cGAACCTAAGCTTTCGACCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATg < 2:354030/139‑1 (MQ=255) aCCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCg > 1:281513/1‑79 (MQ=255) aCCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCg < 2:281513/79‑1 (MQ=255) aCCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCgg < 1:117628/102‑1 (MQ=255) aCCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCgg > 2:117628/1‑102 (MQ=255) aGCTTTCGAGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTa < 1:179124/139‑1 (MQ=255) aGCACGACTTTCTCTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTACGCTCcag < 1:193849/139‑1 (MQ=255) ctctctcTTCATCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTACGCTCCAGCAGGttt < 2:626835/136‑1 (MQ=255) aTCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACg > 1:636673/1‑90 (MQ=255) aTCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACg < 2:636673/90‑1 (MQ=255) aTCTATAGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTACGCTCCAGCAGGTTTAACCATCAgg > 1:369087/1‑139 (MQ=255) taGCCCCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTACGCTCCAGCAGGTTTAACCATCAGGCAGTc > 1:451631/1‑139 (MQ=255) | GAGGAAACAAAATTAACGCAGAATCTTCTTCTCAGCCAAATCCAGCGCAAAGTAGCTGAAAATCAGATCCGCACCCGCACGCTTAATCGAACCTAAGCTTTCGAGCACGACTTTCTCTTCATCTATAGCACCCGCCAGCGCGGCGAACTTAATCATCGCATACTCACCGCTCACCTGATACGCGCCAATCGGCAATTCAGTACGTTCACGCAGCTCACGCACGATGTCGAGGTACGCTCCAGCAGGTTTAACCATCAGGCAGTC > NZ_CP009273/384197‑384460 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |