| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,103,672 | C→T | T242T (ACG→ACA) | mdoC ← | glucans biosynthesis protein MdoC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,103,672 | 0 | C | T | 100.0% | 63.4 / NA | 17 | T242T (ACG→ACA) | mdoC | glucans biosynthesis protein MdoC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/11); total (6/11) | |||||||||||
CACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGCGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGAACGGCAAATAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT > NZ_CP009273/1103544‑1103803 | cacaGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACa < 1:416994/139‑1 (MQ=255) aCCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATg > 2:613307/1‑138 (MQ=255) gTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGcc < 2:630670/138‑1 (MQ=255) gTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGcc < 1:440638/138‑1 (MQ=255) gTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGcc < 1:512641/138‑1 (MQ=255) gCCACTGCCATAGCGCTGGTTGAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGAACGGc < 1:613307/139‑1 (MQ=255) ggTTGAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGAACGGc > 1:23994/1‑122 (MQ=255) ggTTGAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGAACGGc < 2:23994/122‑1 (MQ=255) gAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGAACGGCAAATAAAACAGCGTTTGCAt < 1:414337/138‑1 (MQ=255) tAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGcc > 1:389687/1‑95 (MQ=255) tAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGcc < 2:389687/95‑1 (MQ=255) aGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGAACGGCAAATAAAACAGCGTTTGCATGACAATaaaa < 1:502986/139‑1 (MQ=255) ctgctgcAAGGGTACAGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGAACGGCAAATAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACt > 1:264001/1‑139 (MQ=255) aGCCACGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGAACGGCAAATAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATa < 2:185390/139‑1 (MQ=255) cGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGaa > 1:481446/1‑68 (MQ=255) cGAGACGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGaa < 2:481446/68‑1 (MQ=255) agaCGGTGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGAACGGCAAATAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAt > 1:121827/1‑138 (MQ=255) | CACAGACCGAGGACCATGGTGATCACCGACTCGGTTTCGTACATCCAGGCATCGCCACTGCCATAGCGCTGGTTGAGTAAATAAGCGACAAACGCCAATGCTGCTGCAAGGGTACAGCCACGAGACGGCGTGGTAAACAAGGCTTTAAGATGAGGGAAAATGAAAGCCAGTGCGCCGAGGATAAAGAACGGCAAATAAAACAGCGTTTGCATGACAATAAAATTGAACATGCCATTACTCAGAATGGGCGGATACACAAT > NZ_CP009273/1103544‑1103803 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |