| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,071,153 | G→C | G35A (GGC→GCC) | cbtA → | type IV toxin‑antitoxin system cytoskeleton‑binding toxin CbtA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,071,153 | 0 | G | C | 100.0% | 103.1 / NA | 29 | G35A (GGC→GCC) | cbtA | type IV toxin‑antitoxin system cytoskeleton‑binding toxin CbtA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (17/12); total (17/12) | |||||||||||
TTATATCTGCATATCAGGAAAATCTTCAGTATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGGCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTGCGTACCGACCAGCCG > NZ_CP009273/2071020‑2071283 | ttATATCTGCATATCAGGAAAATCTTCAGTATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTca > 2:595148/1‑139 (MQ=255) tatCTGCATATCAGGAAAATCTTCAGTATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTcaca < 1:595148/138‑1 (MQ=255) tCAGGAAAATCTTCAGTATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGaca < 2:182912/138‑1 (MQ=255) cAGTATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGa < 2:243345/138‑1 (MQ=255) aaaCATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACgtgt > 1:37471/1‑139 (MQ=255) aCATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGa < 2:175852/139‑1 (MQ=255) ttACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGAtt > 1:512043/1‑138 (MQ=255) ttACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGAtt > 2:20715/1‑138 (MQ=255) ggCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGTCTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGACGAACGTGTGACTGa < 2:227342/124‑1 (MQ=255) ggCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGa > 1:227342/1‑124 (MQ=255) gCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTcaca > 2:427084/1‑85 (MQ=255) gCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTcaca < 1:427084/85‑1 (MQ=255) gCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTTaga > 1:572785/1‑136 (MQ=255) gCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGagg > 1:1713/1‑137 (MQ=255) gCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGagg > 2:14034/1‑137 (MQ=255) gcggcCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAggcaggca < 2:441038/139‑1 (MQ=255) cAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCa < 1:20715/139‑1 (MQ=255) aGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGAt > 2:130207/1‑99 (MQ=255) aGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGAt < 1:130207/99‑1 (MQ=255) tctcCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCgg > 1:584127/1‑139 (MQ=255) tctcCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCgg > 2:443214/1‑139 (MQ=255) ttGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACtt > 2:248419/1‑139 (MQ=255) gCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGaa < 1:248419/139‑1 (MQ=255) ctgctgTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATAc < 2:572785/138‑1 (MQ=255) ctgTCCCGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATAcgcg < 2:37471/138‑1 (MQ=255) ccGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTg > 2:15683/1‑139 (MQ=255) ccGACTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTg > 2:318425/1‑139 (MQ=255) aCTGCTGGACCAGCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTGCg > 2:269614/1‑138 (MQ=255) gCACTATGCCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTGCGTACCGACCAGCCg > 1:542982/1‑139 (MQ=255) | TTATATCTGCATATCAGGAAAATCTTCAGTATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGGCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTGCGTACCGACCAGCCG > NZ_CP009273/2071020‑2071283 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |