Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3798335	3798341	7	2 [0]	[1] 2	rfaS	LPS core biosynthesis protein RfaS

AACACTGTCATTAATGATAATTATGTCATCTTTTTTAATATCATTGAGGTAATGCTTGATGAATAATCGCCCCAGCCATGCATTAT  >  NZ_CP009273/3798249‑3798334                                                                                      | aacaCTGTCATTAATGATAATTATGTCATCTTTTTTAATATCATTGAGGTAATGCTTGATGAATAATCGCCCCAGCCATGCATTat  >  1:211575/1‑86 (MQ=255) aacaCTGTCATTAATGATAATTATGTCATCTTTTTTAATATCATTGAGGTAATGCTTGATGAATAATCGCCCCAGCCATGCATTat  <  2:211575/86‑1 (MQ=255)                                                                                      | AACACTGTCATTAATGATAATTATGTCATCTTTTTTAATATCATTGAGGTAATGCTTGATGAATAATCGCCCCAGCCATGCATTAT  >  NZ_CP009273/3798249‑3798334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑