| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,718,241 | Δ1 bp | coding (1864/2013 nt) | ydhK → | FUSC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,718,240 | 0 | G | . | 100.0% | 112.5 / NA | 26 | coding (1863/2013 nt) | ydhK | FUSC family protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (13/13); total (13/13) | |||||||||||
AACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCTGGCGGCTGTACTGCTCGCTTTCGCAACTTGAGCAAGCACCACC > NZ_CP009273/1718106‑1718368 | aaCTGTTCTCATG‑TGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcgcca < 1:519040/137‑4 (MQ=255) gtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTa > 2:203524/1‑137 (MQ=255) gtCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTa > 1:342650/1‑137 (MQ=255) gCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACAGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGa < 2:29147/139‑1 (MQ=255) cAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGAt < 1:203524/139‑1 (MQ=255) cgcgACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGa < 2:342650/139‑1 (MQ=255) tCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCg < 2:504716/139‑1 (MQ=255) cgTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcgcca < 1:420159/96‑4 (MQ=255) cgTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTggcgcca > 2:420159/1‑93 (MQ=255) cgTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGtca > 1:161561/1‑139 (MQ=255) tCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGc > 1:173340/1‑130 (MQ=255) tCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGc < 2:173340/130‑1 (MQ=255) aGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGt > 1:545163/1‑138 (MQ=255) tttCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTg < 1:445765/65‑1 (MQ=255) tttCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTg > 2:445765/1‑65 (MQ=255) tttCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGt > 2:422799/1‑100 (MQ=255) tttCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGt < 1:422799/100‑1 (MQ=255) tttCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTc > 2:158317/1‑139 (MQ=255) tttCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTc > 2:138096/1‑139 (MQ=255) tCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGGCAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCt < 2:161561/138‑1 (MQ=255) ttgcgggggAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCTggcgg < 1:454845/133‑1 (MQ=255) ttGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCTggcgg < 2:203131/137‑1 (MQ=255) cGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCTGGCGGCTGTa > 2:351990/1‑139 (MQ=255) cGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCTGGCGGCTGTa < 1:351990/139‑1 (MQ=255) tgatgaGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTg > 2:22193/1‑47 (MQ=255) tgatgaGTGAGCGTGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTg < 1:22193/47‑1 (MQ=255) tGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCTGGCGGCTGTACTGCt < 1:58885/124‑1 (MQ=255) tGGCGTTCAGCAAAAATCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCTGGCGGCTGTACTGCt > 2:58885/1‑124 (MQ=255) aaaTCACTGGC‑GCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGTGGCAATTGTCTGGCGGCTGTACTGCTCGCTTTCGCAACTTGCGCAAGCaccacc > 2:376596/1‑139 (MQ=255) | AACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCTGGCGGCTGTACTGCTCGCTTTCGCAACTTGAGCAAGCACCACC > NZ_CP009273/1718106‑1718368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |