| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 572,447 | Δ1 bp | intergenic (‑166/‑407) | BW25113_RS02855 ← / → essD | porin/phage lysis protein EssD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 572,446 | 0 | G | . | 100.0% | 43.4 / NA | 11 | intergenic (‑165/‑408) | BW25113_RS02855/essD | porin/phage lysis protein EssD |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (3/8); total (3/8) | |||||||||||
ACTGCGCGATAAATATTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAA > NZ_CP009273/572322‑572560 | aCTGCGCGATAAATATTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTGaat < 1:200092/138‑1 (MQ=255) tGCGCGATAAATATTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTGaataa > 1:257369/1‑138 (MQ=255) aTCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTGAATAAAAATAAATCTATTAGCCAAttt < 2:522176/139‑1 (MQ=255) tgtgATTATTTCAAGGTGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTatat > 1:253598/1‑138 (MQ=255) ttattGCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTTAATAAAAATAAATCTATTAGCCAATTTATATTAACgg < 2:253598/139‑1 (MQ=255) tttCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTg < 1:31273/139‑1 (MQ=255) tttCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTg < 1:316189/139‑1 (MQ=255) tttCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTg < 2:512547/139‑1 (MQ=255) ttGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGct < 2:257369/138‑1 (MQ=255) tGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGctc > 1:546259/1‑138 (MQ=255) cTTTTTTCTATCGAATCCTATTCAT‑GCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGaaa < 2:379747/139‑1 (MQ=255) | ACTGCGCGATAAATATTCATCTAATCAATGTGATTATTTCAAGATGTAAGTTTTGGTTTCTCGTTTGATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAAACCGGCTAAAAATAACACTGGAAA > NZ_CP009273/572322‑572560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |