Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 1,638,057 | A→C | W169G (TGG→GGG) | ydfU ← | DUF968 domain‑containing protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 1,638,057 | 0 | A | C | 100.0% | 94.5 / NA | 27 | W169G (TGG→GGG) | ydfU | DUF968 domain‑containing protein |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (19/8); total (19/8) |
GGCGGTCAGCTCTCCCGGTACGATGTCGCTTTCGCGGTACACCGAGCAGATTTTTTCCGCTGGTAATCCCAGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCACCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGATTCCGATGTCTGGTCACGCAGTTG > NZ_CP009273/1637929‑1638192 | ggCGGTCAGCTCTCCCGGTACGATGTCGCTTTCGCGGTACACCGAGCAGATTTTTTCCGCTGGTAATCCCAGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAAt > 2:100133/1‑139 (MQ=255) tCGCTTTCGCGGTACACCGAGCAGATTTTTTCCGCTGGTAATCCCAGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCt < 2:576737/139‑1 (MQ=255) cgcgGTACACCGAGCAGATTTTTTCCGCTGGTAATCCCAGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTAc < 2:580479/138‑1 (MQ=255) gcgGTACACCGAGCAGATTTTTTCCGCTGGTAATCCCAGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCg > 2:270754/1‑139 (MQ=255) gcgGTACACCGAGCAGATTTTTTCCGCTGGTAATCCCAGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCg > 2:216240/1‑139 (MQ=255) gAGCAGATTTTTTCCGCTGGTAATCCCAGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGt > 1:310057/1‑139 (MQ=255) gCAGATTTTTTCCGCTGGTAATCCCAGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGa < 1:204913/139‑1 (MQ=255) tttCCGCTGGTAATCCCAGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGa < 1:100133/138‑1 (MQ=255) aGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTg < 1:117307/139‑1 (MQ=255) ccTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGagcaag > 1:13002/1‑139 (MQ=255) cAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAagcag > 1:70405/1‑139 (MQ=255) ggTAGTGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCt > 2:98586/1‑139 (MQ=255) tGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGt > 1:98542/1‑139 (MQ=255) tGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGt > 1:378621/1‑139 (MQ=255) tGCATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGt > 2:210096/1‑139 (MQ=255) cATCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGa > 1:521608/1‑139 (MQ=255) tCCACCACCTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGAtt > 2:495141/1‑139 (MQ=255) accaccTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTAc < 2:157196/64‑1 (MQ=255) accaccTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTAc > 1:157196/1‑64 (MQ=255) caccTGATTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGATTCCGAt > 1:449676/1‑139 (MQ=255) aTTGCAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGATTCCGATGTCTgg > 1:193546/1‑139 (MQ=255) cAGACCGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGATTCCGATGTCTGGTCa < 2:70405/138‑1 (MQ=255) cGCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGATTCCGATGTCTGGTCACGCAgt > 2:24601/1‑139 (MQ=255) gCCCCCCAGGATAATTCAGCCAAAGATAATTCCCg > 2:505153/1‑35 (MQ=255) gCCCCCCAGGATAATTCAGCCAAAGATAATTCCCg < 1:505153/35‑1 (MQ=255) gCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGATTCCGATGTCTGGTCACGCAgtt > 2:481258/1‑139 (MQ=255) gCCCCCCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGATTCCGATGTCTGGTCACGCAgtt > 1:536899/1‑139 (MQ=255) ccccccAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGATTCCGATGTCTGGTCACGCAgttg > 2:419872/1‑139 (MQ=255) | GGCGGTCAGCTCTCCCGGTACGATGTCGCTTTCGCGGTACACCGAGCAGATTTTTTCCGCTGGTAATCCCAGCGAACGACGCGATACAGCCTCAGGTAGTGCATCCACCACCTGATTGCAGACCGCCCACCAGGATAATTCAGCCAAAGATAATTCCCGCTCCTGCGTACCGCTTATTGCGTGACGGATGACGTCAATCACCCATGCTGTCAGATTTTGTTGAGCAAGCAGCTCCAGTGATTCCGATGTCTGGTCACGCAGTTG > NZ_CP009273/1637929‑1638192 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |