| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,879,784 | T→G | V288G (GTG→GGG) | yeaW → | carnitine monooxygenase subunit YeaW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,879,784 | 0 | T | G | 100.0% | 91.3 / NA | 27 | V288G (GTG→GGG) | yeaW | carnitine monooxygenase subunit YeaW |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (16/11); total (16/11) | |||||||||||
TCCGAACAGTCGTTTAAATTTGAAGAGGGTACGGATGCGGCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGTGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTGTTCCGTCCGGAAGATTTACGTCTGGTTGAAAGCG > NZ_CP009273/1879657‑1879915 | tCCGAACAGTCGTTTAAATTTGAAGAGGGTACGGATGCGGCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGaaa < 2:12513/139‑1 (MQ=255) tGCCGCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAAt < 2:350728/139‑1 (MQ=255) cGGCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTa > 2:297294/1‑118 (MQ=255) cGGCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTa < 1:297294/118‑1 (MQ=255) cGGCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATg > 2:214971/1‑138 (MQ=255) gCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATg > 1:212901/1‑136 (MQ=255) gCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATg > 1:579727/1‑136 (MQ=255) gCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCGGCAAAACTACGATATTTACTTCACCAATg < 2:579727/136‑1 (MQ=255) gTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACcga < 1:265163/139‑1 (MQ=255) tCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACcgac > 2:381311/1‑137 (MQ=255) tGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAAt > 1:460284/1‑108 (MQ=255) tGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAAt < 2:460284/108‑1 (MQ=255) tGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGaa < 2:252307/111‑1 (MQ=255) tGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGaa > 1:252307/1‑111 (MQ=255) cACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACt > 1:300428/1‑71 (MQ=255) cACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACt < 2:300428/71‑1 (MQ=255) cACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGAt > 1:310328/1‑139 (MQ=255) cACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGAt > 1:480893/1‑139 (MQ=255) ccccGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGAtgt > 2:222704/1‑139 (MQ=255) aGGGATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTGTtccgtccg > 2:431028/1‑139 (MQ=255) ggATGATGACGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTGTTCCGTCCGGa < 1:214971/139‑1 (MQ=255) tgatgaCGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTa < 1:42406/55‑1 (MQ=255) tgatgaCGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTa > 2:42406/1‑55 (MQ=255) tgatgaCGGTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTGTTCCGTCCgg > 1:482916/1‑135 (MQ=255) ggTCATTTATGAATTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTGTTCCGTCCGGAAGATTTACGt < 1:505570/139‑1 (MQ=255) aTTCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTGTTCCGTCCGGAAGATTTACGTCTGGTTGAAAGc > 2:564924/1‑139 (MQ=255) tCCCGGGGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTGTTCCGTCCGGAAGATTTACGTCTGGTTGAAAGCg > 1:250290/1‑138 (MQ=255) | TCCGAACAGTCGTTTAAATTTGAAGAGGGTACGGATGCGGCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGTGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTGTTCCGTCCGGAAGATTTACGTCTGGTTGAAAGCG > NZ_CP009273/1879657‑1879915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |