| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,039,724 | A→G | T436A (ACA→GCA) | yeeJ → | inverse autotransporter adhesin YeeJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,039,724 | 0 | A | G | 100.0% | 58.4 / NA | 17 | T436A (ACA→GCA) | yeeJ | inverse autotransporter adhesin YeeJ |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (11/6); total (11/6) | |||||||||||
TGCAGAAACAGCTTGACCCGAATGAAGTCGCTGCACGGCGTAGCCTTGCAGGCAGCCGTTATGATCTGGTGGATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGACAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCA > NZ_CP009273/2039593‑2039841 | tGCAGAAACAGCTTGACCCGAATGAAGTCGCTGCACGGCGTAGCCTTGCAGGCAGCCGTTATGATCTGGTGGATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACAGGTTCGCCTGACCCTGGCAGAccc > 2:213272/1‑139 (MQ=255) gCTTGACCCGAATGAAGTCGCTGCACGGCGTAGCCTTGCAGGCAGCCGTTATGATCTGGTGGATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAggg < 1:357046/139‑1 (MQ=255) aTGATCTGGTGGATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATg < 1:231426/138‑1 (MQ=255) tggtggATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACa > 2:406618/1‑80 (MQ=255) tggtggATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACa < 1:406618/80‑1 (MQ=255) tCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAgg > 1:311908/1‑75 (MQ=255) tCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAgg < 2:311908/75‑1 (MQ=255) tCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCAc > 2:374436/1‑139 (MQ=255) ttCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCg > 1:105643/1‑138 (MQ=255) ttCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTAACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCg > 1:46041/1‑138 (MQ=255) cTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCAc > 2:451239/1‑139 (MQ=255) cTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCAc > 1:270897/1‑139 (MQ=255) cTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCAc > 1:12635/1‑139 (MQ=255) tCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAGGGAAGTCAg < 2:188439/56‑1 (MQ=255) tCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAGGGAAGTCAg > 1:188439/1‑56 (MQ=255) tCGCAAAAAAGAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCt > 1:375604/1‑139 (MQ=255) gAACTGGTTCGCCTGACCCTGGCAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCa < 2:268377/139‑1 (MQ=255) | TGCAGAAACAGCTTGACCCGAATGAAGTCGCTGCACGGCGTAGCCTTGCAGGCAGCCGTTATGATCTGGTGGATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGACAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCA > NZ_CP009273/2039593‑2039841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |