| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,088,811 | T→C | V69A (GTC→GCC) | hisA → | 1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino]imidazole‑4‑ carboxamide isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,088,811 | 0 | T | C | 100.0% | 54.4 / NA | 17 | V69A (GTC→GCC) | hisA | 1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino]imidazole‑4‑ carboxamide isomerase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (11/6); total (11/6) | |||||||||||
CAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGCAGGATTACGCCGCGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGTCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTGCGCGCGTAGTGGTCGGCTCCACCGCGGTGAAATCACAAGATATGGTGAAAGG > NZ_CP009273/2088675‑2088946 | cAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGCAGGATTACGCCGCGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCcg < 2:404812/139‑1 (MQ=255) cgcgATTACGGTAACGACCCGCTGCCGCGATTGCAGGATTACGCCGCGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCgg > 2:380990/1‑139 (MQ=255) cAGGATTACGCCGCGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTggcggcggc < 1:67685/138‑1 (MQ=255) cAGGATTACGCCGCGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTggcggcggc < 2:291989/138‑1 (MQ=255) cgccgcGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGc > 2:281171/1‑139 (MQ=255) ccGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTgg < 1:380990/138‑1 (MQ=255) cGAAGGGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGATCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTggcg > 2:332465/1‑139 (MQ=255) aaGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTggcggc < 1:207677/139‑1 (MQ=255) tgctgcACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGt > 1:300259/1‑138 (MQ=255) ggctgcACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTCAACGTCAAATCCCGCTGATTAAAACCCTGGCCACGGGCGTTAACGTTCCGGGGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGGGgcggcgg > 2:388930/2‑137 (MQ=255) ggtggATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGGAGCg > 2:8327/1‑139 (MQ=255) ggtggATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCg > 2:503941/1‑139 (MQ=255) aCCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTgcgc > 1:393218/1‑139 (MQ=255) ccGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTGCGCGCGTAGTGGTCGGCt > 1:41587/1‑139 (MQ=255) aaaTCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTGCGCGCGTAGTGGTCGGCTCCACCGCGGTGaa < 1:503941/139‑1 (MQ=255) tGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTGCGCGCGTAGTGGTCGGCTCCACCGCGGTGAAATCACAAGATATGGTGAAAgg > 2:246934/1‑139 (MQ=255) tGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTGCGCGCGTAGTGGTCGGCTCCACCGCGGTGAAATCACAAGATATGGTGAAAgg > 1:117071/1‑139 (MQ=255) | CAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGCAGGATTACGCCGCGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGTCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTGCGCGCGTAGTGGTCGGCTCCACCGCGGTGAAATCACAAGATATGGTGAAAGG > NZ_CP009273/2088675‑2088946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |