Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 485,143 | A→G | D1051G (GAT→GGT) | mscK → | mechanosensitive channel MscK |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 485,143 | 0 | A | G | 100.0% | 135.0 / NA | 38 | D1051G (GAT→GGT) | mscK | mechanosensitive channel MscK |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (20/18); total (20/18) |
GTCTCGGCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGATCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTGAACCGTACTATCGATCAGCTGTGCCGTGAAAACGACATCAACATTGCCTTTAACCAGC > NZ_CP009273/485008‑485262 | gTCTCGGCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCa > 1:311290/1‑139 (MQ=255) tctcGGCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCAt > 2:378071/1‑139 (MQ=255) tctcGGCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCAt > 1:37848/1‑139 (MQ=255) ggCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAg < 2:486330/138‑1 (MQ=255) gCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCt < 2:102051/139‑1 (MQ=255) gCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCt < 1:418102/139‑1 (MQ=255) gCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCt < 2:331848/139‑1 (MQ=255) gCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGt < 2:153592/138‑1 (MQ=255) gCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTc > 1:572958/1‑139 (MQ=255) tGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTa < 2:572958/138‑1 (MQ=255) ccGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCg > 2:350952/1‑139 (MQ=255) cGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGt > 1:421829/1‑139 (MQ=255) cGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGt > 2:208986/1‑139 (MQ=255) cGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGt > 1:517209/1‑139 (MQ=255) cGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGt > 1:536130/1‑139 (MQ=255) aTCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCCTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTg > 2:529579/1‑138 (MQ=255) aGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCt < 2:104353/111‑1 (MQ=255) aGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCt > 1:104353/1‑111 (MQ=255) aGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGAc < 2:517209/139‑1 (MQ=255) gCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCg > 1:404430/1‑138 (MQ=255) tgtTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTAc < 2:421829/139‑1 (MQ=255) ggcggcGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAg < 2:50331/139‑1 (MQ=255) ggcggcGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCCTGACCGTAGTCGTACTGTCGATGAg > 1:78258/1‑139 (MQ=255) ggcgACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTg < 1:377574/139‑1 (MQ=255) ggcgACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTg < 2:37848/139‑1 (MQ=255) ggcgACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCCTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTg < 1:529579/139‑1 (MQ=255) cTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTGAACCg > 1:458912/1‑139 (MQ=255) gCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTGACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTGAACCGTACt < 2:375730/139‑1 (MQ=255) ccAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTGAACCGTACTATCGATCAGCTGTGCCGTGaaa < 1:54358/139‑1 (MQ=255) aaTGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCt < 1:424529/54‑1 (MQ=255) aaTGCCGGAAGTCTTCTTTACGGCATGTGGTGCCAGCACGTTGGGTCATGAGCt > 2:424529/1‑54 (MQ=255) tGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTa < 2:316275/61‑1 (MQ=255) tGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTa > 1:316275/1‑61 (MQ=255) aGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCt > 1:103172/1‑45 (MQ=255) aGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCt < 2:103172/45‑1 (MQ=255) ttcttTACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTGAACCGTACTATCGATCAGCTGTGCCGTGAAAACGACATCAACATTg > 2:175314/1‑139 (MQ=255) tACGGCATTTGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTGAACCGTACTATCGATCAGCTGTGCCGTGAAAACGACATCAACATTGCCtt > 2:535947/1‑138 (MQ=255) tttGGTGCCAGCACGTTGGGTCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTGAACCGTACTATCGATCAGCTGTGCCGTGAAAACGACATCAACATTGCCTTTAACCAGc > 1:112430/1‑139 (MQ=255) | GTCTCGGCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGATCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTGAACCGTACTATCGATCAGCTGTGCCGTGAAAACGACATCAACATTGCCTTTAACCAGC > NZ_CP009273/485008‑485262 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |