| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 871,743 | A→G | E318G (GAA→GGA) | dgcI → | GGDEF domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 871,743 | 0 | A | G | 100.0% | 52.8 / NA | 16 | E318G (GAA→GGA) | dgcI | GGDEF domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (9/7); total (9/7) | |||||||||||
ACTGGATGGCGGGCTTTTCTTTTCGGCTGCCGATGTCAAAAAACTCTACAGTATGTATAACTCGGCGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGAAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATGAAGTGTTGATGAAAGTGGTGAAAATCCTTAAATCACAGATCCCGGTAGATAAAG > NZ_CP009273/871609‑871877 | aCTGGATGGCGGGCTTTTCTTTTCGGCTGCCGATGTCAAAAAACTCTACAGTATGTATAACTCGGCGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGgaa > 1:211899/1‑137 (MQ=255) cGGGCTTTTCTTTTCGGCTGCCGATGTCAAAAAACTCTACAGTATGTATAACTCGGCGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGGAAAAGGCGGTTAt > 2:162357/1‑139 (MQ=255) ttcttttcGGCTGCCGATGTCAAAAAACTCTACAGTATGTATAACTCGGCGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGGAAAAGGCGGTTATTTGTGc < 2:298747/138‑1 (MQ=255) ttcttttcGGCTGCCGATGTCAAAAAACTCTACAGTATGTATAACTCGGCGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGGAAAAGGCGGTTATTTGTGc < 1:566705/138‑1 (MQ=255) tgtatAACTCGGCGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGGAAAAGGCgg > 2:446360/1‑91 (MQ=255) tgtatAACTCGGCGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGGAAAAGGCgg < 1:446360/91‑1 (MQ=255) cGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCAttt > 2:56145/1‑139 (MQ=255) aGCAATGGGCAGAAAATCCTTTGACGACGATTTAAAAGAGCTGCCGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATGGAGTGTtgat > 2:203905/1‑138 (MQ=255) aGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATGAAGTGTtgat > 2:265518/1‑138 (MQ=255) tGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATa > 1:346629/1‑78 (MQ=255) tGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATa < 2:346629/78‑1 (MQ=255) ccTTTGACGAAGATTTAAAGGCGCTGCCGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATGaa > 2:221405/1‑113 (MQ=255) ccTTTGACGAAGATTTAAAGGCGCTGCCGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATGaa < 1:221405/113‑1 (MQ=255) gcTGCCGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATg > 2:208030/1‑89 (MQ=255) gcTGCCGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATg < 1:208030/89‑1 (MQ=255) cTGCCGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATGAAGTGTTGATGAAAGTGGTGAAAATCCTTAAATCACAGATCCCGGTAGAt > 2:482714/1‑138 (MQ=255) ccGGGAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATGAAGTGTTGATGAAAGTGGTGAAAATCCTTAAATCACAGATCCCGGTAGATAAAg < 1:265518/139‑1 (MQ=255) | ACTGGATGGCGGGCTTTTCTTTTCGGCTGCCGATGTCAAAAAACTCTACAGTATGTATAACTCGGCGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGAAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATGAAGTGTTGATGAAAGTGGTGAAAATCCTTAAATCACAGATCCCGGTAGATAAAG > NZ_CP009273/871609‑871877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |