| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,156,804 | A→C | G68G (GGT→GGG) | fhuE ← | ferric‑rhodotorulic acid/ferric‑coprogen receptor FhuE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,156,804 | 0 | A | C | 100.0% | 82.7 / NA | 25 | G68G (GGT→GGG) | fhuE | ferric‑rhodotorulic acid/ferric‑coprogen receptor FhuE |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (9/16); total (9/16) | |||||||||||
GCCTGACTTTTGCTGATCCCCAGCGTGTTTTCCATCACTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTACCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTGCAGCAAAAGCGGCAGAAGGTAATAGTGCCA > NZ_CP009273/1156670‑1156928 | gCCTGACTTTTGCTGATCCCCAGCGTGTTTTCCATCACTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCg > 2:290522/1‑139 (MQ=255) cTGACTTTTGCTGATCCCCAGCGTGTTTTCCATCACTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCg > 1:329084/1‑137 (MQ=255) aCTTTTGCTGATCCCCAGCGTGTTTTCCATCACTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCagag > 1:304983/1‑139 (MQ=255) aTCCCCAGCGTGTTTTCCATCACTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGtt < 2:200979/138‑1 (MQ=255) aTCCCCAGCGTGTTTTCCATCACTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTa < 1:31172/139‑1 (MQ=255) aTCCCCAGCGTGTTTTCCATCACTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTa < 1:362873/139‑1 (MQ=255) aTCCCCAGCGTGTTTTCCATCACTTCGCCCAGCGTTTGTAACTGCTGATCTGCCATCCGCTGCTGGCTAACAATAGTGACGGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTa < 1:308610/139‑1 (MQ=255) cccAGCGTGTTTTCCATCACTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACg < 1:279003/138‑1 (MQ=255) tCACTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGcc < 2:59069/139‑1 (MQ=255) cTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCcatc < 1:59424/139‑1 (MQ=255) ctgctgATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGaa < 2:382307/139‑1 (MQ=255) tgctgATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAAc > 2:85526/1‑139 (MQ=255) tgctgATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAAc > 2:8230/1‑139 (MQ=255) cAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGc < 1:263843/139‑1 (MQ=255) gTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTg > 1:325083/1‑139 (MQ=255) aaTATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTGCAGCAAAAGCGGCa < 2:325083/139‑1 (MQ=255) aaTATCACGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTGCAGCAAAAGCGGCa < 1:25750/139‑1 (MQ=255) cGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTGCAGCAAAAGCgg > 1:63614/1‑130 (MQ=255) cGTTGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTGCAGCAAAAGCgg < 2:63614/130‑1 (MQ=255) ttGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTa < 2:268743/41‑1 (MQ=255) ttGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTa > 1:268743/1‑41 (MQ=255) tGAGTCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGG‑GCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTGCAGCAAAAGCGGCAGAAGGTAATAg > 1:433606/1‑139 (MQ=255) tCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTGCAGCAAAAGCGGCAGAAGGTAATAGTGc < 1:459814/139‑1 (MQ=255) tCATCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCAGTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTGCAGCAAAAGCGGCAGAAGGTAATAGTGc < 1:447935/139‑1 (MQ=255) aTCTGCATTTTGGTCCCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTGCAGCAAAAGCGGCAGAAGGTAATAGTGCCa < 1:176401/139‑1 (MQ=255) | GCCTGACTTTTGCTGATCCCCAGCGTGTTTTCCATCACTTCGCCCAGCGTTTGTAACTGCTGATCTTCCATCCGCTGCTGGCTAACAATAGTGACCGACTGAGGAATATCACGTTGAGTCATCTGCATTTTGGTACCCGCAGAGGTAGACGTTACGCTGTAATCATTTTCGCCATCATCTGGAGCTGTGGCTGAACCCTCAACAATCACCGTTTCTTCAGTGGCTGGTGCAGCAAAAGCGGCAGAAGGTAATAGTGCCA > NZ_CP009273/1156670‑1156928 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |