Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 3354473 3354481 9 2 [0] [1] 2 gltD/gltF glutamate synthase subunit GltD/DUF1120 domain‑containing protein

TCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAG  >  NZ_CP009273/3354420‑3354472
                                                    |
tCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAg  >  1:424883/1‑53 (MQ=255)
tCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAg  <  2:424883/53‑1 (MQ=255)
                                                    |
TCCCAGCAAGTTGGCTATTTCTGAACGAGTTATTTATTTACATTCACAAACAG  >  NZ_CP009273/3354420‑3354472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: