Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3797730	3797732	3	3 [0]	[0] 2	rfaS	LPS core biosynthesis protein RfaS

AAAATACTCTAACTTATCCCAATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAATACATTTATATTATT  >  NZ_CP009273/3797640‑3797729                                                                                          | aaaaTACTCTAACTTATCCCAATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAATACATTTATattatt  <  2:521417/90‑1 (MQ=255)                                                gagaTTCACTATAGATTTCTGAACCAAATACATTTATattatt  <  1:306027/43‑1 (MQ=255)                                                gagaTTCACTATAGATTTCTGAACCAAATACATTTATattatt  >  2:306027/1‑43 (MQ=255)                                                                                          | AAAATACTCTAACTTATCCCAATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAATACATTTATATTATT  >  NZ_CP009273/3797640‑3797729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑