Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4427367	4427391	25	6 [1]	[0] 2	cysQ/BW25113_RS21900	3'(2'),5'‑bisphosphate nucleotidase CysQ/hypothetical protein

TTCCTGAATCCGGGGTTCAGAGTGTCTATTTACTAAATTCAGATGGCAGAAACAGTGTATTTCCTGATTCTGCCATCCTGATTTCTCCCAACCTAAAA  >  NZ_CP009273/4427277‑4427374                                                                                          |         ttCCTGAATCCGGGGTTCAGAGTGTCTATTTACTAAATTCAGATGGCAGAAACAGTGTATTTCCTGATTCTGCCATCCTGATTTCTCCCa          <  1:590640/90‑1 (MQ=255) ttCCTGAATCCGGGGTTCAGAGTGTCTATTTACTAAATTCAGATGGCAGAAACAGTGTATTTCCTGATTCTGCCATCCTGATTTCTCCCa          <  2:571920/90‑1 (MQ=255) ttCCTGAATCCGGGGTTCAGAGTGTCTATTTACTAAATTCAGATGGCAGAAACAGTGTATTTCCTGATTCTGCCATCCTGATTTCTCCCa          <  2:78425/90‑1 (MQ=255)         tCCGGGGTTCAGAGTGTCTATTTACTAAATTCAGATGGCAGAAACAGTGTATTTCCTGATTCTGCCATCCTGATTTCTCCCAACCTaaaa  <  1:493610/90‑1 (MQ=255)                    gagTGTCTATTTACTAAATTCAGATGGCAGAAACAGTGTATTTCCTGATTCTGCCATCCTGATTTCTCCCa          >  1:299036/1‑71 (MQ=255)                    gagTGTCTATTTACTAAATTCAGATGGCAGAAACAGTGTATTTCCTGATTCTGCCATCCTGATTTCTCCCa          <  2:299036/71‑1 (MQ=255)                                                                                          |         TTCCTGAATCCGGGGTTCAGAGTGTCTATTTACTAAATTCAGATGGCAGAAACAGTGTATTTCCTGATTCTGCCATCCTGATTTCTCCCAACCTAAAA  >  NZ_CP009273/4427277‑4427374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑