Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2099582	2099701	120	2 [1]	[1] 5	wzy	O16 family O‑antigen polymerase

TTCGAGACAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAATAGCTTAGCTCCGCGGAAATATAAACATAATCCG  >  NZ_CP009273/2099699‑2099788    |                                                                                       ttCGAGACAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAATAGCTTAGCTCCGCGGAAATATAAACATAATCCg  >  1:76257/1‑90 (MQ=255)    gagaCAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCaa                                     >  1:121814/1‑52 (MQ=255)    gagaCAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCaa                                     <  2:121814/52‑1 (MQ=255)    gagaCAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAAt                                   <  1:452471/54‑1 (MQ=255)    gagaCAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAAt                                   >  2:452471/1‑54 (MQ=255)    |                                                                                       TTCGAGACAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAATAGCTTAGCTCCGCGGAAATATAAACATAATCCG  >  NZ_CP009273/2099699‑2099788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑