Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3106864	3106866	3	2 [0]	[0] 2	yghG/pppA	type II secretion system pilot lipoprotein GspS‑beta/prepilin peptidase PppA

GTAACGCTCAACAATAGCGATATTAATACCCTCCCTGGCATTTGTTTTATCGACATGGTAAATAATCTCTAAGGTTATTAATA  >  NZ_CP009273/3106781‑3106863                                                                                   | gTAACGCTCAACAATAGCGATATTAATACCCTCCCTGGCATTTGTTTTATCGACATGGTAAATAATCTCTAAGGTTATtaata  >  1:135743/1‑83 (MQ=255) gTAACGCTCAACAATAGCGATATTAATACCCTCCCTGGCATTTGTTTTATCGACATGGTAAATAATCTCTAAGGTTATtaata  <  2:135743/83‑1 (MQ=255)                                                                                   | GTAACGCTCAACAATAGCGATATTAATACCCTCCCTGGCATTTGTTTTATCGACATGGTAAATAATCTCTAAGGTTATTAATA  >  NZ_CP009273/3106781‑3106863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑