Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3797716	3797905	190	2 [0]	[1] 2	rfaS	LPS core biosynthesis protein RfaS

AATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAAT  >  NZ_CP009273/3797660‑3797715                                                        | aaTCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAAt  >  1:206281/1‑56 (MQ=255) aaTCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAAt  <  2:206281/56‑1 (MQ=255)                                                        | AATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAAT  >  NZ_CP009273/3797660‑3797715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑