Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3577857	3578076	220	2 [1]	[1] 2	[BW25113_RS25760]	[BW25113_RS25760]

CAATGTATCACACAGGAATAATAATATAACACTCAACAATAATATTTATTATAATTATGATTACTTATCACGACGCATTCGCGAAAGCGAACCATTACCTTGAT  >  NZ_CP009273/3578063‑3578166               |                                                                                          cAATGTATCACACAGGAATAATAATATAACACTCAACAATAATATTTATTATAATTATGATTACTTATCACGACGCATTCGCGAAAGTGa                >  2:221994/1‑90 (MQ=255)               ggAATAATAATATAACACTCAACAATAATATTTATTATAATTATGATTACTTATCACGACGCATTCGCGAAAGCGAACCATTACCTtgat  >  1:150271/1‑90 (MQ=255)               |                                                                                          CAATGTATCACACAGGAATAATAATATAACACTCAACAATAATATTTATTATAATTATGATTACTTATCACGACGCATTCGCGAAAGCGAACCATTACCTTGAT  >  NZ_CP009273/3578063‑3578166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑