Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3794625	3794653	29	2 [1]	[0] 2	rfaJ	lipopolysaccharide 1,2‑glucosyltransferase RfaJ

TATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCC  >  NZ_CP009273/3794654‑3794712 |                                                           tattgtaCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATcc  <  1:101533/59‑1 (MQ=255) tattgtaCTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATcc  >  2:101533/1‑59 (MQ=255) |                                                           TATTGTACTCACGAGGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCC  >  NZ_CP009273/3794654‑3794712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑