Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1206789	1206794	6	2 [0]	[0] 2	mcrA/BW25113_RS23640	5‑methylcytosine‑specific endonuclease McrA/isocitrate/isopropylmalate family dehydrogenase

ACTCAAAAACACATGTTTATAATCAATGAGTTATAGAAA  >  NZ_CP009273/1206750‑1206788                                       | aCTCAAAAACACATGTTTATAATCAATGAGTTATAGaaa  <  1:576225/39‑1 (MQ=255) aCTCAAAAACACATGTTTATAATCAATGAGTTATAGaaa  >  2:576225/1‑39 (MQ=255)                                       | ACTCAAAAACACATGTTTATAATCAATGAGTTATAGAAA  >  NZ_CP009273/1206750‑1206788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑