Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1211762	1211815	54	2 [0]	[0] 3	[ymgA]	[ymgA]

CCAAACCGAAGAACAGCGACAGCTGACAATAAAAGTA  >  NZ_CP009273/1211725‑1211761                                     | ccAAACCGAAGAACAGCGACAGCTGACAATAAAAGTa  <  1:139873/37‑1 (MQ=255) ccAAACCGAAGAACAGCGACAGCTGACAATAAAAGTa  >  2:139873/1‑37 (MQ=255)                                     | CCAAACCGAAGAACAGCGACAGCTGACAATAAAAGTA  >  NZ_CP009273/1211725‑1211761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑