Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 1431297 1431371 75 2 [0] [1] 5 ompN/nifJ porin OmpN/pyruvate:ferredoxin (flavodoxin) oxidoreductase

TTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATA  >  NZ_CP009273/1431257‑1431296
                                       |
ttAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGata  >  1:389890/1‑40 (MQ=255)
ttAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGata  <  2:389890/40‑1 (MQ=255)
                                       |
TTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATA  >  NZ_CP009273/1431257‑1431296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: