Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2102896	2102906	11	2 [0]	[1] 3	wzx	O16 family O‑antigen flippase

TTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAAC  >  NZ_CP009273/2102832‑2102895                                                                | tttACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCaacaaac  <  1:505262/64‑1 (MQ=255) tttACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCaacaaac  >  2:505262/1‑64 (MQ=255)                                                                | TTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAAC  >  NZ_CP009273/2102832‑2102895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑