Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2463145	2463244	100	3 [1]	[1] 2	BW25113_RS12270	hypothetical protein

TAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAA  >  NZ_CP009273/2463058‑2463147                                                                                       |    tAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCtaataa  <  1:225962/90‑1 (MQ=255)                                         aTGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCtaa     <  1:456342/47‑1 (MQ=255)                                         aTGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCtaa     >  2:456342/1‑47 (MQ=255)                                                                                       |    TAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAA  >  NZ_CP009273/2463058‑2463147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑