Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 2791917 2792041 125 9 [1] [1] 2 stpA/alaE DNA‑binding protein StpA/L‑alanine exporter AlaE

TATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGATTATTTCAGC  >  NZ_CP009273/2791827‑2791975
                                                                                         |                                                           
tATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATc                                                             <  1:227048/90‑1 (MQ=255)
tATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATc                                                             <  2:597317/90‑1 (MQ=255)
                           taataaAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATc                                                             >  1:290588/1‑63 (MQ=255)
                           taataaAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATc                                                             <  2:290588/63‑1 (MQ=255)
                                         ttttAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATc                                                             <  1:230432/49‑1 (MQ=255)
                                         ttttAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATc                                                             >  2:230432/1‑49 (MQ=255)
                                            tAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATc                                                             >  1:199975/1‑46 (MQ=255)
                                            tAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATc                                                             <  2:199975/46‑1 (MQ=255)
                                                           aaaaGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGATTATTTCAGc  <  2:469017/90‑1 (MQ=255)
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TATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGATTATTTCAGC  >  NZ_CP009273/2791827‑2791975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: