Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2897880	2897909	30	2 [0]	[0] 2	ygcE/queE	FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE

TCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTG  >  NZ_CP009273/2897833‑2897879                                               | tCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTg  >  1:249201/1‑47 (MQ=255) tCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTg  <  2:249201/47‑1 (MQ=255)                                               | TCACACAAACAACACATCCATTATGTTAAAGAGCACTTAATCCATTG  >  NZ_CP009273/2897833‑2897879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑