Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2986844	2986870	27	2 [1]	[1] 3	ygeH/BW25113_RS14840	HilA family transcriptional regulator YgeH/hypothetical protein

TGAGAGTGAAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTT  >  NZ_CP009273/2986754‑2986856                                                                                          |              tGAGAGTGAAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGc               <  2:4332/90‑1 (MQ=255)              cATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTAttt  <  1:306914/90‑1 (MQ=255)                                                                                          |              TGAGAGTGAAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTT  >  NZ_CP009273/2986754‑2986856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑