Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3106852	3106866	15	2 [1]	[0] 2	yghG/pppA	type II secretion system pilot lipoprotein GspS‑beta/prepilin peptidase PppA

ACAGCCACTTAATAATCCTGTAACGCTCAACAATAGCGATATTAATACCCTCCCTGGCATTTGTTTTATCGACATGGTAAATAATCTCTAAGGT  >  NZ_CP009273/3106762‑3106855                                                                                          |     acaGCCACTTAATAATCCTGTAACGCTCAACAATAGCGATATTAATACCCTCCCTGGCATTTGTTTTATCGACATGGTAAATAATCTCTa      <  2:643506/90‑1 (MQ=255)     ccACTTAATAATCCTGTAACGCTCAACAATAGCGATATTAATACCCTCCCTGGCATTTGTTTTATCGACATGGTAAATAATCTCTAAGGt  <  2:336442/90‑1 (MQ=255)                                                                                          |     ACAGCCACTTAATAATCCTGTAACGCTCAACAATAGCGATATTAATACCCTCCCTGGCATTTGTTTTATCGACATGGTAAATAATCTCTAAGGT  >  NZ_CP009273/3106762‑3106855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑