Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3261710	3261778	69	3 [1]	[0] 2	[BW25113_RS16190]–[yhaC]	[BW25113_RS16190],[yhaC]

ATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTC  >  NZ_CP009273/3261622‑3261711                                                                                        |   aTTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATtc  <  2:331101/90‑1 (MQ=255)                                         ccTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAAt    <  1:501296/48‑1 (MQ=255)                                         ccTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAAt    >  2:501296/1‑48 (MQ=255)                                                                                        |   ATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTC  >  NZ_CP009273/3261622‑3261711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑