Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3650231	3650241	11	5 [0]	[0] 4	hdeA/hdeD	acid‑activated periplasmic chaperone HdeA/acid‑resistance protein HdeD

TCAATTTCGACACTGAGGTTATAACCTGGTTTTCTGTATATGTCATGTTGATGGAAAATATCAAAATCAGATATTTTTATTTCAATACAA  >  NZ_CP009273/3650141‑3650230                                                                                          | tCAATTTCGACACTGAGGTTATAACCTGGTTTTCTGTATATGTCATGTTGATGGAAAATATCAAAATCAGATATTTTTATTTCAATACaa  <  1:425766/90‑1 (MQ=255)                                         tGTCATGTTGATGGAAAATATCAAAATCAGATATTTTTATTTCAATACaa  <  1:558415/50‑1 (MQ=255)                                         tGTCATGTTGATGGAAAATATCAAAATCAGATATTTTTATTTCAATACaa  >  2:558415/1‑50 (MQ=255)                                                 tGATGGAAAATATCAAAATCAGATATTTTTATTTCAATACaa  >  1:278223/1‑42 (MQ=255)                                                 tGATGGAAAATATCAAAATCAGATATTTTTATTTCAATACaa  <  2:278223/42‑1 (MQ=255)                                                                                          | TCAATTTCGACACTGAGGTTATAACCTGGTTTTCTGTATATGTCATGTTGATGGAAAATATCAAAATCAGATATTTTTATTTCAATACAA  >  NZ_CP009273/3650141‑3650230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑