Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3791617	3791621	5	2 [0]	[0] 2	waaU	glycosyltransferase family 9 protein

AAACAAGTTTAAGAAGTGAGTTAAAACTCACTTCTTATCTATACA  >  NZ_CP009273/3791572‑3791616                                             | aaaCAAGTTTAAGAAGTGAGTTAAAACTCACTTCTTATCTATACa  >  1:591707/1‑45 (MQ=255) aaaCAAGTTTAAGAAGTGAGTTAAAACTCACTTCTTATCTATACa  <  2:591707/45‑1 (MQ=255)                                             | AAACAAGTTTAAGAAGTGAGTTAAAACTCACTTCTTATCTATACA  >  NZ_CP009273/3791572‑3791616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑